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    Rab3 GTPase-activating protein catalytic subunit [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835597, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Rab3 GTPase-activating protein catalytic subunit
    Primary source
    TAIR:AT5G55060
    Locus tag
    AT5G55060
    See related
    Araport:AT5G55060
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MCO15.1; MCO15_1
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    13
    Sequence:
    Chromosome: 5; NC_003076.8 (22341750..22346646)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene GDSL-like Lipase/Acylhydrolase superfamily protein Neighboring gene tRNA-Phe Neighboring gene tRNA-Phe Neighboring gene Dihydrolipoamide succinyltransferase Neighboring gene ras-related nuclear protein 4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001203612.1
    NM_124888.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables GTPase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Rab3 GTPase-activating protein catalytic subunit
    NP_001318800.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G58510.1).
    NP_200317.2
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G58510.1); Has 223 Blast hits to 218 proteins in 80 species: Archae - 0; Bacteria - 2; Metazoa - 117; Fungi - 6; Plants - 65; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      22341750..22346646
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001345104.1 → NP_001318800.1  Rab3 GTPase-activating protein catalytic subunit [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4K3B8, Q9FLQ5

    2. NM_124888.4 → NP_200317.2  Rab3 GTPase-activating protein catalytic subunit [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200317.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654GBK7, Q683D2
      Conserved Domains (1) summary
      pfam13890
      Location:356 → 505
      Rab3-GTPase_cat; Rab3 GTPase-activating protein catalytic subunit

    3. NM_001203612.1 → NP_001190541.1  Rab3 GTPase-activating protein catalytic subunit [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190541.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4K3B8, Q9FLQ5
      Conserved Domains (1) summary
      pfam13890
      Location:263 → 412
      Rab3-GTPase_cat; Rab3 GTPase-activating protein catalytic subunit
    Nucleotide Protein
    Heading Accession and Version

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