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    MIOX5 myo-inositol oxygenase 5 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835765, updated on 18-Sep-2024

    Summary

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    Official Symbol
    MIOX5
    Official Full Name
    myo-inositol oxygenase 5
    Primary source
    TAIR:AT5G56640
    Locus tag
    AT5G56640
    See related
    Araport:AT5G56640
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MIK19.9; MIK19_9; myo-inositol oxygenase 5
    Summary
    Myo-Inositol Oxygenase gene family
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    Genomic context

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    See MIOX5 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    11
    Sequence:
    Chromosome: 5; NC_003076.8 (22927230..22929717, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene NAC domain containing protein 99 Neighboring gene ncRNA Neighboring gene phosphofructokinase 7 Neighboring gene IAA-leucine resistant (ILR)-like 1 Neighboring gene ncRNA Neighboring gene IAA-leucine resistant (ILR)-like 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Myo-inositol oxygenase genes are involved in the development of syncytia induced by Heterodera schachtii in Arabidopsis roots. Siddique S, et al. New Phytol, 2009 Oct. PMID 19691674
    2. Myoinositol oxygenase controls the level of myoinositol in Arabidopsis, but does not increase ascorbic acid. Endres S, et al. Plant Physiol, 2009 Feb. PMID 19091876, Free PMC Article
    3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    NM_001345210.1
    NM_125047.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables inositol oxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in inositol catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within syncytium formation IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    myo-inositol oxygenase 5
    NP_200475.1
    • myo-inositol oxygenase 5 (MIOX5); FUNCTIONS IN: inositol oxygenase activity, iron ion binding; INVOLVED IN: syncytium formation; LOCATED IN: cytoplasm; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF706 (InterPro:IPR007828); BEST Arabidopsis thaliana protein match is: myo-inositol oxygenase 4 (TAIR:AT4G26260.2); Has 490 Blast hits to 488 proteins in 159 species: Archae - 0; Bacteria - 27; Metazoa - 132; Fungi - 132; Plants - 97; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      22927230..22929717 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_125047.3 → NP_200475.1  myo-inositol oxygenase 5 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200475.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LFV4, Q9FJU4
      UniProtKB/TrEMBL
      A0A178U852
      Conserved Domains (1) summary
      pfam05153
      Location:64 → 314
      MIOX; Myo-inositol oxygenase

    2. NM_001345210.1 → NP_001332424.1  myo-inositol oxygenase 5 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BGX3, A0A7G2FKY8
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FJU4.1

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