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    NRT2.4 nitrate transporter 2.4 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836198, updated on 18-Sep-2024

    Summary

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    Official Symbol
    NRT2.4
    Official Full Name
    nitrate transporter 2.4
    Primary source
    TAIR:AT5G60770
    Locus tag
    AT5G60770
    See related
    Araport:AT5G60770
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARABIDOPSIS THALIANA NITRATE TRANSPORTER 2.4; ATNRT2.4; MAE1.3; MAE1_3; nitrate transporter 2.4
    Summary
    member of High affinity nitrate transporter family
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    Genomic context

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    See NRT2.4 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    4
    Sequence:
    Chromosome: 5; NC_003076.8 (24444365..24447127)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene CAAX amino terminal protease family protein Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein Neighboring gene nitrate transporter 2.3 Neighboring gene ABC transporter family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Arabidopsis nitrate transporter NRT2.4 plays a double role in roots and shoots of nitrogen-starved plants. Kiba T, et al. Plant Cell, 2012 Jan. PMID 22227893, Free PMC Article
    2. Nitrate transport capacity of the Arabidopsis thaliana NRT2 family members and their interactions with AtNAR2.1. Kotur Z, et al. New Phytol, 2012 May. PMID 22432443
    3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Results demonstrate that NRT2.4 is a nitrate transporter that has a role in both roots and shoots under N starvation.
      Title: The Arabidopsis nitrate transporter NRT2.4 plays a double role in roots and shoots of nitrogen-starved plants.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables nitrate transmembrane transporter activity IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    enables nitrate transmembrane transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within cellular response to nitrate IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within nitrate transmembrane transport IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in nitrate transmembrane transport IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    nitrate transporter 2.4
    NP_200885.1
    • nitrate transporter 2.4 (NRT2.4); FUNCTIONS IN: nitrate transmembrane transporter activity; INVOLVED IN: transmembrane transport; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 2:1 (TAIR:AT1G08090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      24444365..24447127
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_125470.2 → NP_200885.1  nitrate transporter 2.4 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200885.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FJH8
      UniProtKB/TrEMBL
      A0A178UB04, A0A5S9YGD9
      Conserved Domains (1) summary
      PLN00028
      Location:28 → 505
      PLN00028; nitrate transmembrane transporter; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FJH8.1

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