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    Pyruvate kinase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836488, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Pyruvate kinase family protein
    Primary source
    TAIR:AT5G63680
    Locus tag
    AT5G63680
    See related
    Araport:AT5G63680
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MBK5.16; MBK5_16
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    4
    Sequence:
    Chromosome: 5; NC_003076.8 (25490065..25492763)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Scorpion toxin-like knottin superfamily protein Neighboring gene SPT4 homolog 2 Neighboring gene Nucleic acid-binding, OB-fold-like protein Neighboring gene zinc ion binding / DNA binding protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Advanced proteomic analyses yield a deep catalog of ubiquitylation targets in Arabidopsis. Kim DY, et al. Plant Cell, 2013 May. PMID 23667124, Free PMC Article
    2. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
    3. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    4. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_125763.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables magnesium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables potassium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables pyruvate kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in glycolytic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plastid HDA PubMed 

    General protein information

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    Preferred Names
    Pyruvate kinase family protein
    NP_201173.1
    • Pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, potassium ion binding, magnesium ion binding, catalytic activity; INVOLVED IN: response to cadmium ion, glycolysis; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT5G08570.1); Has 10212 Blast hits to 10099 proteins in 2690 species: Archae - 168; Bacteria - 6017; Metazoa - 548; Fungi - 219; Plants - 540; Viruses - 0; Other Eukaryotes - 2720 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      25490065..25492763
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001345601.1 → NP_001331217.1  Pyruvate kinase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UF62, A0A384KII3, Q0WN17, Q9FFP6
      Conserved Domains (1) summary
      PLN02461
      Location:1 → 510
      PLN02461; Probable pyruvate kinase

    2. NM_001345602.1 → NP_001331216.1  Pyruvate kinase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UF62, A0A384KII3, Q0WN17, Q9FFP6
      Conserved Domains (1) summary
      PLN02461
      Location:1 → 510
      PLN02461; Probable pyruvate kinase

    3. NM_125763.3 → NP_201173.1  Pyruvate kinase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_201173.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UF62, A0A384KII3, Q0WN17, Q9FFP6
      Conserved Domains (1) summary
      PLN02461
      Location:1 → 510
      PLN02461; Probable pyruvate kinase
    Nucleotide Protein
    Heading Accession and Version

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