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    Ran-binding protein in the microtubule-organising centre protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836814, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Ran-binding protein in the microtubule-organising centre protein
    Primary source
    TAIR:AT5G66810
    Locus tag
    AT5G66810
    See related
    Araport:AT5G66810
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MUD21.5; MUD21_5
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    10
    Sequence:
    Chromosome: 5; NC_003076.8 (26672873..26676672)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Protein kinase superfamily protein Neighboring gene membrane-associated kinase regulator-like protein Neighboring gene uncharacterized protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001345803.1
    NM_001345804.1
    NM_126079.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Ran-binding protein in the microtubule-organising centre protein
    NP_201482.2
    • CONTAINS InterPro DOMAIN/s: CTLH, C-terminal LisH motif (InterPro:IPR006595); BEST Arabidopsis thaliana protein match is: LisH and RanBPM domains containing protein (TAIR:AT1G61150.1); Has 333 Blast hits to 242 proteins in 88 species: Archae - 0; Bacteria - 0; Metazoa - 104; Fungi - 47; Plants - 152; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      26672873..26676672
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001345802.1 → NP_001330744.1  Ran-binding protein in the microtubule-organising centre protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BBP5

    2. NM_126079.5 → NP_201482.2  Ran-binding protein in the microtubule-organising centre protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_201482.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9YJP6, A0A654GEU6, F4K250
      Conserved Domains (2) summary
      smart00668
      Location:497 → 553
      CTLH; C-terminal to LisH motif
      pfam10607
      Location:119 → 220
      CLTH; CTLH/CRA C-terminal to LisH motif domain

    3. NM_001345803.1 → NP_001330743.1  Ran-binding protein in the microtubule-organising centre protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BBR1, A0A654GEU6

    4. NM_001345804.1 → NP_001330745.1  Ran-binding protein in the microtubule-organising centre protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BBP4
    Nucleotide Protein
    Heading Accession and Version

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