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    CIPK25 CBL-interacting protein kinase 25 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 832582, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CIPK25
    Official Full Name
    CBL-interacting protein kinase 25
    Primary source
    TAIR:AT5G25110
    Locus tag
    AT5G25110
    See related
    Araport:AT5G25110
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    CBL-interacting protein kinase 25; SNF1-RELATED PROTEIN KINASE 3.25; SnRK3.25; T11H3.120; T11H3_120
    Summary
    member of AtCIPKs
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    Genomic context

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    See CIPK25 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    1
    Sequence:
    Chromosome: 5; NC_003076.8 (8657604..8659352, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Sas10/Utp3/C1D family Neighboring gene early nodulin-like protein 13 Neighboring gene Endomembrane protein 70 protein family Neighboring gene ncRNA Neighboring gene cytochrome p450, family 71, subfamily B, polypeptide 11

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The calcineurin β-like interacting protein kinase CIPK25 regulates potassium homeostasis under low oxygen in Arabidopsis. Tagliani A, et al. J Exp Bot, 2020 May 9. PMID 32053194, Free PMC Article
    2. CBL-interacting protein kinase 25 contributes to root meristem development. Kumar Meena M, et al. J Exp Bot, 2019 Jan 1. PMID 30239807, Free PMC Article
    3. The ABA-AtNAP-SAG113 PP2C module regulates leaf senescence by dephoshorylating SAG114 SnRK3.25 in Arabidopsis. Wang G, et al. Mol Hortic, 2023 Oct 30. PMID 37899482, Free PMC Article
    4. Disease-specific expression of host genes during downy mildew infection of Arabidopsis. Huibers RP, et al. Mol Plant Microbe Interact, 2009 Sep. PMID 19656045
    5. Comprehensive structural, interaction and expression analysis of CBL and CIPK complement during abiotic stresses and development in rice. Kanwar P, et al. Cell Calcium, 2014 Aug. PMID 24970010

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. The calcineurin beta-like interacting protein kinase CIPK25 regulates potassium homeostasis under low oxygen in Arabidopsis.
      Title: The calcineurin β-like interacting protein kinase CIPK25 regulates potassium homeostasis under low oxygen in Arabidopsis.
    2. CIPK25 plays an important role in the co-ordination of auxin and cytokinin signaling in root meristem development.
      Title: CBL-interacting protein kinase 25 contributes to root meristem development.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_122420.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within defense response to fungus IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within intracellular potassium ion homeostasis IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within response to hypoxia IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in Golgi apparatus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    CBL-interacting protein kinase 25
    NP_568466.1
    • CBL-interacting protein kinase 25 (CIPK25); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: defense response to fungus; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 5 (TAIR:AT5G10930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      8657604..8659352 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_122420.2 → NP_568466.1  CBL-interacting protein kinase 25 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568466.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8W1D5, Q94A54
      UniProtKB/TrEMBL
      A0A7G2FGF2
      Conserved Domains (3) summary
      cd12195
      Location:342 → 455
      CIPK_C; C-terminal regulatory domain of Calcineurin B-Like (CBL)-interacting protein kinases
      smart00220
      Location:43 → 297
      S_TKc; Serine/Threonine protein kinases, catalytic domain
      cd14663
      Location:42 → 296
      STKc_SnRK3; Catalytic domain of the Serine/Threonine Kinases, Sucrose nonfermenting 1-related protein kinase subfamily 3
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8W1D5.1

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