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    T-box protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 832833, updated on 18-Sep-2024

    Summary

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    Official Full Name
    T-box protein
    Primary source
    TAIR:AT5G27710
    Locus tag
    AT5G27710
    See related
    Araport:AT5G27710
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T1G16.40; T1G16_40
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    7
    Sequence:
    Chromosome: 5; NC_003076.8 (9812931..9815420)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Ribosomal protein S21e Neighboring gene pseudo Neighboring gene tRNA-Glu Neighboring gene Small nuclear ribonucleoprotein family protein Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001344032.1
    NM_122653.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    T-box protein
    NP_198123.2
    • unknown protein; Has 49 Blast hits to 49 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      9812931..9815420
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_122653.4 → NP_198123.2  T-box protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_198123.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178USP8, Q0WPW1, Q6NM16

    2. NM_001344032.1 → NP_001332427.1  T-box protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BGX1
    Nucleotide Protein
    Heading Accession and Version

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