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    UGT78D3 UDP-glucosyl transferase 78D3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831566, updated on 18-Sep-2024

    Summary

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    Official Symbol
    UGT78D3
    Official Full Name
    UDP-glucosyl transferase 78D3
    Primary source
    TAIR:AT5G17030
    Locus tag
    AT5G17030
    See related
    Araport:AT5G17030
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F2K13.180; F2K13_180; UDP-glucosyl transferase 78D3
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    Genomic context

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    See UGT78D3 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_003076.8 (5603133..5604893, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Major facilitator superfamily protein Neighboring gene exportin 1A Neighboring gene UDP-Glycosyltransferase superfamily protein Neighboring gene UDP-glucosyl transferase 78D2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Bacterial synthesis of a flavonoid deoxyaminosugar conjugate in Escherichia coli expressing a glycosyltransferase of Arabidopsis thaliana. Kim BG, et al. Chembiochem, 2010 Nov 22. PMID 20981748
    2. Engineering flavonoid glycosyltransferases for enhanced catalytic efficiency and extended sugar-donor selectivity. Kim HS, et al. Planta, 2013 Oct. PMID 23801300
    3. Comprehensive flavonol profiling and transcriptome coexpression analysis leading to decoding gene-metabolite correlations in Arabidopsis. Yonekura-Sakakibara K, et al. Plant Cell, 2008 Aug. PMID 18757557, Free PMC Article
    4. Arabidopsis glycosyltransferases as biocatalysts in fermentation for regioselective synthesis of diverse quercetin glucosides. Lim EK, et al. Biotechnol Bioeng, 2004 Sep 5. PMID 15352060
    5. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. First report on the construction of fusion proteins with expanded sugar-donor range and enhanced catalytic efficiencies for sugar donors.
      Title: Engineering flavonoid glycosyltransferases for enhanced catalytic efficiency and extended sugar-donor selectivity.
    2. Data indicate that UGT, AtUGT78D3, has specificity for UDP-arabinose and uses quercetin as a sugar acceptor to make quercetin-3-O-arabinoside.
      Title: Bacterial synthesis of a flavonoid deoxyaminosugar conjugate in Escherichia coli expressing a glycosyltransferase of Arabidopsis thaliana.
    3. Recombinant UGT78D3 (At5g17030) protein could convert quercetin to quercetin 3-O-arabinoside. The strict substrate specificity of UGT78D3 for flavonol aglycones and UDP-arabinose indicate that UGT78D3 is a flavonol arabinosyltransferase.
      Title: Comprehensive flavonol profiling and transcriptome coexpression analysis leading to decoding gene-metabolite correlations in Arabidopsis.
    Submit: New GeneRIF Correction

    General gene information

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    NM_121709.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables flavonol 3-O-arabinosyltransferase activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    enables glycosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables quercetin 3-O-glucosyltransferase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    UDP-glucosyl transferase 78D3
    NP_197205.1
    • UDP-glucosyl transferase 78D3 (UGT78D3); FUNCTIONS IN: quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, flavonol 3-O-arabinosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 78D2 (TAIR:AT5G17050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      5603133..5604893 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_121709.2 → NP_197205.1  UDP-glucosyl transferase 78D3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_197205.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LFK0
      UniProtKB/TrEMBL
      A0A178UMG9, A0A384LMC1, A0A5S9Y4U9, W8QN92
      Conserved Domains (1) summary
      cd03784
      Location:12 → 448
      GT1_Gtf-like; UDP-glycosyltransferases and similar proteins
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LFK0.1

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