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    BCA6 beta carbonic anhydrase 6 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842185, updated on 18-Sep-2024

    Summary

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    Official Symbol
    BCA6
    Official Full Name
    beta carbonic anhydrase 6
    Primary source
    TAIR:AT1G58180
    Locus tag
    AT1G58180
    See related
    Araport:AT1G58180
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    A. THALIANA BETA CARBONIC ANHYDRASE 6; ATBCA6; beta carbonic anhydrase 6; T15M6.18
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    Genomic context

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    See BCA6 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    9
    Sequence:
    Chromosome: 1; NC_003070.9 (21537577..21540038, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene jacalin lectin-like protein Neighboring gene Disease resistance-responsive (dirigent-like protein) family protein Neighboring gene receptor like protein 9 Neighboring gene MSCS-like 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization and expression analysis of genes encoding alpha and beta carbonic anhydrases in Arabidopsis. Fabre N, et al. Plant Cell Environ, 2007 May. PMID 17407539
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001036129.3
    NM_001198330.1
    NM_001333816.1
    NM_001333817.1
    NM_001333818.1
    NM_104599.5
    NM_179492.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables carbonate dehydratase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in carbon utilization IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in mitochondrion IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    beta carbonic anhydrase 6
    NP_001031206.1
    • beta carbonic anhydrase 6 (BCA6); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: carbon utilization; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, prokaryotic-like, conserved site (InterPro:IPR015892), Carbonic anhydrase (InterPro:IPR001765); BEST Arabidopsis thaliana protein match is: beta carbonic anhydrase 5 (TAIR:AT4G33580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_001185259.1
    • beta carbonic anhydrase 6 (BCA6); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: carbon utilization; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, prokaryotic-like, conserved site (InterPro:IPR015892), Carbonic anhydrase (InterPro:IPR001765); BEST Arabidopsis thaliana protein match is: beta carbonic anhydrase 5 (TAIR:AT4G33580.1).
    NP_176114.2
    • beta carbonic anhydrase 6 (BCA6); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: carbon utilization; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, prokaryotic-like, conserved site (InterPro:IPR015892), Carbonic anhydrase (InterPro:IPR001765); BEST Arabidopsis thaliana protein match is: beta carbonic anhydrase 5 (TAIR:AT4G33580.1); Has 5080 Blast hits to 5063 proteins in 1507 species: Archae - 55; Bacteria - 3884; Metazoa - 56; Fungi - 211; Plants - 357; Viruses - 0; Other Eukaryotes - 517 (source: NCBI BLink).
    NP_849823.1
    • beta carbonic anhydrase 6 (BCA6); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: carbon utilization; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, prokaryotic-like, conserved site (InterPro:IPR015892), Carbonic anhydrase (InterPro:IPR001765); BEST Arabidopsis thaliana protein match is: beta carbonic anhydrase 5 (TAIR:AT4G33580.1); Has 5006 Blast hits to 4991 proteins in 1499 species: Archae - 55; Bacteria - 3848; Metazoa - 56; Fungi - 209; Plants - 346; Viruses - 0; Other Eukaryotes - 492 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      21537577..21540038 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_104599.5 → NP_176114.2  beta carbonic anhydrase 6 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176114.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      B9DFK8, F4I9R8, Q8L833, Q9C6F5, Q9C6R2
      UniProtKB/TrEMBL
      A0A5S9WMP2, A0A654EJ93
      Conserved Domains (1) summary
      PLN02154
      Location:1 → 290
      PLN02154; carbonic anhydrase

    2. NM_001333816.1 → NP_001320703.1  beta carbonic anhydrase 6 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ANM5

    3. NM_001036129.3 → NP_001031206.1  beta carbonic anhydrase 6 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031206.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WMP2, A0A654EJ93
      Conserved Domains (1) summary
      cl00391
      Location:1 → 239
      beta_CA; Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an ...

    4. NM_001198330.1 → NP_001185259.1  beta carbonic anhydrase 6 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001185259.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      B9DFK8, F4I9R8, Q8L833, Q9C6F5, Q9C6R2
      UniProtKB/TrEMBL
      A0A5S9WMP2, A0A654EJ93
      Conserved Domains (1) summary
      PLN02154
      Location:1 → 290
      PLN02154; carbonic anhydrase

    5. NM_001333817.1 → NP_001320705.1  beta carbonic anhydrase 6 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WMP2, A0A654EJ93

    6. NM_001333818.1 → NP_001320704.1  beta carbonic anhydrase 6 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WMP2, A0A654EJ93

    7. NM_179492.4 → NP_849823.1  beta carbonic anhydrase 6 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_849823.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WMP2, A0A654EJ93
      Conserved Domains (1) summary
      PLN02154
      Location:1 → 249
      PLN02154; carbonic anhydrase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9C6F5.1

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