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    Sec14p-like phosphatidylinositol transfer family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829816, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Sec14p-like phosphatidylinositol transfer family protein
    Primary source
    TAIR:AT4G36640
    Locus tag
    AT4G36640
    See related
    Araport:AT4G36640
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AP22.47; AP22_47
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    6
    Sequence:
    Chromosome: 4; NC_003075.7 (17276882..17279428, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Vacuolar sorting protein 39 Neighboring gene tRNA-Ile Neighboring gene ncRNA Neighboring gene plant-specific TFIIB-related protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001085032.2
    NM_119827.4

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Sec14p-like phosphatidylinositol transfer family protein
    NP_001078501.1
    • Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT1G75170.2); Has 1767 Blast hits to 1763 proteins in 213 species: Archae - 0; Bacteria - 0; Metazoa - 475; Fungi - 541; Plants - 540; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink).
    NP_195382.1
    • Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT1G75170.2); Has 2667 Blast hits to 2660 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 843; Fungi - 695; Plants - 854; Viruses - 0; Other Eukaryotes - 275 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      17276882..17279428 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001342414.1 → NP_001329225.1  Sec14p-like phosphatidylinositol transfer family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V650, A0A384K8Z3, O23217, Q8GYD8
      Conserved Domains (2) summary
      smart00516
      Location:85 → 238
      SEC14; Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p)
      smart01100
      Location:20 → 65
      CRAL_TRIO_N; CRAL/TRIO, N-terminal domain

    2. NM_001085032.2 → NP_001078501.1  Sec14p-like phosphatidylinositol transfer family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001078501.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A8MQS3
      Conserved Domains (1) summary
      smart00516
      Location:25 → 178
      SEC14; Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p)

    3. NM_119827.4 → NP_195382.1  Sec14p-like phosphatidylinositol transfer family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195382.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V650, A0A384K8Z3, O23217, Q8GYD8
      Conserved Domains (2) summary
      smart00516
      Location:85 → 238
      SEC14; Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p)
      smart01100
      Location:20 → 65
      CRAL_TRIO_N; CRAL/TRIO, N-terminal domain
    Nucleotide Protein
    Heading Accession and Version

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