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    hypothetical protein (Protein of unknown function, DUF601) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841116, updated on 18-Sep-2024

    Summary

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    Official Full Name
    hypothetical protein (Protein of unknown function, DUF601)
    Primary source
    TAIR:AT1G46696
    Locus tag
    AT1G46696
    See related
    Araport:AT1G46696
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F2G19.33; F2G19_33
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    6
    Sequence:
    Chromosome: 1; NC_003070.9 (17261860..17264183, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene uncharacterized protein Neighboring gene F-box family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_103606.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    hypothetical protein (Protein of unknown function, DUF601)
    NP_175146.1
    • Protein of unknown function, DUF601; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF601 (InterPro:IPR006736); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF601 (TAIR:AT2G15110.1); Has 2393 Blast hits to 1960 proteins in 383 species: Archae - 25; Bacteria - 366; Metazoa - 883; Fungi - 248; Plants - 130; Viruses - 13; Other Eukaryotes - 728 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      17261860..17264183 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_103606.1 → NP_175146.1  hypothetical protein (Protein of unknown function, DUF601) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_175146.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WJQ0, Q9C631
      Conserved Domains (1) summary
      pfam04642
      Location:201 → 502
      DUF601; Protein of unknown function, DUF601
    Nucleotide Protein
    Heading Accession and Version

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