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    RABB1a RAB GTPase homolog B1A [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827427, updated on 18-Sep-2024

    Summary

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    Official Symbol
    RABB1a
    Official Full Name
    RAB GTPase homolog B1A
    Primary source
    TAIR:AT4G17160
    Locus tag
    AT4G17160
    See related
    Araport:AT4G17160
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATRAB2B; ATRABB1A; DL4615C; FCAALL.364; RAB GTPase homolog B1A
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    Genomic context

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    See RABB1a in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    5
    Sequence:
    Chromosome: 4; NC_003075.7 (9641859..9643738, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene poly(U)-specific endoribonuclease-B protein Neighboring gene pleckstrin homology (PH) domain-containing protein Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene ncRNA Neighboring gene RAB GTPase homolog B1C

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. CHARACTERIZATION OF A RABE (RAS GENE FROM RAT BRAIN E) GTPASE EXPRESSED DURING MORPHOGENESIS IN THE UNICELLULAR GREEN ALGA MICRASTERIAS DENTICULATA (ZYGNEMATOPHYCEAE, STREPTOPHYTA)(1). Vannerum K, et al. J Phycol, 2012 Jun. PMID 27011085
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_117820.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    RAB GTPase homolog B1A
    NP_193449.1
    • RAB GTPase homolog B1A (RABB1a); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog B1C (TAIR:AT4G17170.1); Has 26911 Blast hits to 26856 proteins in 734 species: Archae - 13; Bacteria - 137; Metazoa - 14009; Fungi - 4103; Plants - 2888; Viruses - 20; Other Eukaryotes - 5741 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      9641859..9643738 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_117820.2 → NP_193449.1  RAB GTPase homolog B1A [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_193449.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O23561
      UniProtKB/TrEMBL
      A0A178UXW9, A0A7G2F081
      Conserved Domains (1) summary
      PLN03108
      Location:1 → 204
      PLN03108; Rab family protein; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O23561.1

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