U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    ndhF NADH dehydrogenase subunit 5 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 844705, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    ndhF
    Gene description
    NADH dehydrogenase subunit 5
    Locus tag
    ArthCp071
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ndh5
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See ndhF in Genome Data Viewer
    Sequence:
    NC_000932.1 (110398..112638, complement)

    NC_000932.1Genomic Context describing neighboring genes Neighboring gene tRNA-Arg Neighboring gene tRNA-Asn Neighboring gene hypothetical protein Neighboring gene ribosomal protein L32 Neighboring gene tRNA-Leu

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_000932.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Specific function of a plastid sigma factor for ndhF gene transcription. Favory JJ, et al. Nucleic Acids Res, 2005. PMID 16243785, Free PMC Article
    2. Editing of accD and ndhF chloroplast transcripts is partially affected in the Arabidopsis vanilla cream1 mutant. Tseng CC, et al. Plant Mol Biol, 2010 Jun. PMID 20143129
    3. Complete structure of the chloroplast genome of Arabidopsis thaliana. Sato S, et al. DNA Res, 1999 Oct 29. PMID 10574454

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Findings show that the editing of accD and ndhF transcripts is partially affected in vac1 albino mutant.
      Title: Editing of accD and ndhF chloroplast transcripts is partially affected in the Arabidopsis vanilla cream1 mutant.
    2. Plastid NDH activity is regulated on the transcriptional level by an ndhF-specific plastid sigma factor, SIG4.
      Title: Specific function of a plastid sigma factor for ndhF gene transcription.
    Submit: New GeneRIF Correction

    General protein information

    Go to the top of the page Help
    Preferred Names
    NADH dehydrogenase subunit 5

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000932.1 Reference assembly

      Range
      110398..112638 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_051106.1 NADH dehydrogenase subunit 5 (chloroplast) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_051106.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P56752, Q9MS93
      UniProtKB/TrEMBL
      A0A1B1W4Y7, A0A514YJK5
      Conserved Domains (1) summary
      CHL00025
      Location:1 → 743
      ndhF; NADH dehydrogenase subunit 5
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P56752.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.