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    znf326 zinc finger protein 326 [ Danio rerio (zebrafish) ]

    Gene ID: 571228, updated on 9-Dec-2024

    Summary

    Official Symbol
    znf326provided by ZNC
    Official Full Name
    zinc finger protein 326provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-070424-227
    See related
    Ensembl:ENSDARG00000098348 AllianceGenome:ZFIN:ZDB-GENE-070424-227
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    si:dkey-238n5.2
    Summary
    Predicted to enable RNA polymerase II complex binding activity. Predicted to be involved in regulation of DNA-templated transcription elongation and regulation of RNA splicing. Predicted to act upstream of or within RNA splicing and mRNA processing. Predicted to be part of DBIRD complex. Predicted to be active in nucleus. Orthologous to human ZNF326 (zinc finger protein 326). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See znf326 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 6 NC_007117.7 (25157701..25165693, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 6 NC_007117.6 (25057892..25065885, complement)

    Chromosome 6 - NC_007117.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC137490211 Neighboring gene BarH-like homeobox 2 Neighboring gene leucine rich repeat containing 8 VRAC subunit Db Neighboring gene leucine rich repeat containing 8 VRAC subunit C

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Markers

    Clone Names

    • MGC174183

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables RNA polymerase II complex binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within RNA splicing IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within mRNA processing IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in regulation of DNA-templated transcription elongation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in regulation of DNA-templated transcription elongation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in regulation of RNA splicing ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    part_of DBIRD complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of DBIRD complex ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    DBIRD complex subunit ZNF326
    Names
    zinc finger protein interacting with mRNPs

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001082841.1NP_001076310.1  DBIRD complex subunit ZNF326

      See identical proteins and their annotated locations for NP_001076310.1

      Status: PROVISIONAL

      Source sequence(s)
      CR790380
      UniProtKB/Swiss-Prot
      A2CEZ5, B3DJZ6
      Related
      ENSDARP00000134575.1, ENSDART00000167259.2
      Conserved Domains (1) summary
      pfam04988
      Location:261426
      AKAP95; A-kinase anchoring protein 95 (AKAP95)

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007117.7 Reference GRCz11 Primary Assembly

      Range
      25157701..25165693 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_011015820.1 RNA Sequence

    2. XR_224389.5 RNA Sequence