arl6ip5a ADP-ribosylation factor-like 6 interacting protein 5a [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: arl6ip5aprovided by ZNC
Official Full Name: ADP-ribosylation factor-like 6 interacting protein 5aprovided by ZNC
Primary source: ZFIN:ZDB-GENE-031113-22
See related: Ensembl:ENSDARG00000077044 AllianceGenome:ZFIN:ZDB-GENE-031113-22
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: cb937; arl6ip5; zgc:101611
Summary: Predicted to be involved in negative regulation of transport. Predicted to be located in endoplasmic reticulum membrane and plasma membrane. Predicted to be active in membrane. Is expressed in yolk syncytial layer. Orthologous to human ARL6IP5 (ADP ribosylation factor like GTPase 6 interacting protein 5). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 6

Exon count:: 3

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	6	NC_007117.7 (43234400..43241626)
105	previous assembly	GRCz10 (GCF_000002035.5)	6	NC_007117.6 (43236864..43244090)

Chromosome 6 - NC_007117.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in negative regulation of transport	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
located_in endoplasmic reticulum membrane	IEA Inferred from Electronic Annotation more info
is_active_in membrane	IBA Inferred from Biological aspect of Ancestor more info
located_in membrane	IEA Inferred from Electronic Annotation more info
located_in plasma membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: ADP-ribosylation factor-like 6 interacting protein 5a

Names: ADP-ribosylation factor-like 6 interacting protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.