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    fgfr1op2 FGFR1 oncogene partner 2 [ Danio rerio (zebrafish) ]

    Gene ID: 335511, updated on 9-Dec-2024

    Summary

    Official Symbol
    fgfr1op2provided by ZNC
    Official Full Name
    FGFR1 oncogene partner 2provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-7451
    See related
    Ensembl:ENSDARG00000009657 AllianceGenome:ZFIN:ZDB-GENE-030131-7451
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:64126; wu:fj17h04
    Summary
    Predicted to be involved in response to wounding. Predicted to be located in cytoplasm. Orthologous to human FGFR1OP2 (FGFR1 oncogene partner 2). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See fgfr1op2 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 4 NC_007115.7 (1722899..1730920)
    105 previous assembly GRCz10 (GCF_000002035.5) 4 NC_007115.6 (1873586..1881607)

    Chromosome 4 - NC_007115.7Genomic Context describing neighboring genes Neighboring gene AT-rich interactive domain 2 Neighboring gene growth arrest-specific 2 like 3 Neighboring gene transmembrane 7 superfamily member 3 Neighboring gene mediator complex subunit 21

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by ZFIN

    Process Evidence Code Pubs
    involved_in response to wounding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    FGFR1 oncogene partner 2 homolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_199955.1NP_956249.1  FGFR1 oncogene partner 2 homolog

      See identical proteins and their annotated locations for NP_956249.1

      Status: PROVISIONAL

      Source sequence(s)
      BC053266
      UniProtKB/Swiss-Prot
      Q7T338
      Related
      ENSDARP00000005747.6, ENSDART00000021139.8
      Conserved Domains (1) summary
      pfam05769
      Location:2183
      DUF837; Protein of unknown function (DUF837)

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007115.7 Reference GRCz11 Primary Assembly

      Range
      1722899..1730920
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)