zgc:173837 zgc:173837 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: zgc:173837provided by ZNC
Official Full Name: zgc:173837provided by ZNC
Primary source: ZFIN:ZDB-GENE-080213-12
See related: AllianceGenome:ZFIN:ZDB-GENE-080213-12
Gene type: protein coding
RefSeq status: MODEL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Orthologs: all
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Genomic context

Location:: chromosome: 10

Exon count:: 3

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	10	NC_007121.7 (19593989..19598350)
105	previous assembly	GRCz10 (GCF_000002035.5)	10	NC_007121.6 (19636555..19640585)

Chromosome 10 - NC_007121.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

AW171232 (e-PCR)
- UniSTS:205843

fi09b08.x1 (e-PCR)
- UniSTS:196733

fd14b04.x1 (e-PCR)
- UniSTS:204160

fi31a02.y1 (e-PCR)
- UniSTS:197253

AI722149 (e-PCR)
- UniSTS:206027

fj51e01.x1 (e-PCR)
- UniSTS:188647

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info

General protein information

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Preferred Names: uncharacterized protein LOC100000337; uncharacterized protein zgc:173837

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

NC_007121.7 Reference GRCz11 Primary Assembly

Range

19593989..19598350

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_021479318.2 → XP_021334993.1 uncharacterized protein zgc:173837 isoform X1

UniProtKB/TrEMBL

A0A8M9Q6F4, A0A8M9QCE8
XM_068223945.1 → XP_068080046.1 uncharacterized protein zgc:173837 isoform X3

UniProtKB/TrEMBL

A0A8M9QCE8
XM_068223944.1 → XP_068080045.1 uncharacterized protein zgc:173837 isoform X2

UniProtKB/TrEMBL

A0A8M9QCE8

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

NM_001111233.1: Suppressed sequence

Description

NM_001111233.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.