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    leap2 liver-expressed antimicrobial peptide 2 [ Danio rerio (zebrafish) ]

    Gene ID: 793075, updated on 9-Dec-2024

    Summary

    Official Symbol
    leap2provided by ZNC
    Official Full Name
    liver-expressed antimicrobial peptide 2provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-081022-131
    See related
    Ensembl:ENSDARG00000104654 AllianceGenome:ZFIN:ZDB-GENE-081022-131
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:194626; zgc:194647
    Summary
    Predicted to act upstream of or within defense response to bacterium. Orthologous to human LEAP2 (liver enriched antimicrobial peptide 2). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See leap2 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 7 NC_007118.7 (51754940..51757073, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 7 NC_007118.6 (51479870..51482003, complement)

    Chromosome 7 - NC_007118.7Genomic Context describing neighboring genes Neighboring gene histone deacetylase 8 Neighboring gene phosphorylase kinase, alpha 1a (muscle) Neighboring gene bone morphogenetic protein 15 Neighboring gene glutamic-oxaloacetic transaminase 2b, mitochondrial

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    liver-expressed antimicrobial peptide 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001128777.1NP_001122249.1  liver-expressed antimicrobial peptide 2 precursor

      See identical proteins and their annotated locations for NP_001122249.1

      Status: PROVISIONAL

      Source sequence(s)
      BC162440
      UniProtKB/TrEMBL
      B3DGL6, B3DHL4
      Related
      ENSDARP00000134664.1, ENSDART00000167747.3
      Conserved Domains (1) summary
      pfam07359
      Location:2087
      LEAP-2; Liver-expressed antimicrobial peptide 2 precursor (LEAP-2)

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007118.7 Reference GRCz11 Primary Assembly

      Range
      51754940..51757073 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)