zmp:0000001167 zmp:0000001167 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: zmp:0000001167provided by ZNC
Official Full Name: zmp:0000001167provided by ZNC
Primary source: ZFIN:ZDB-GENE-140106-127
See related: AllianceGenome:ZFIN:ZDB-GENE-140106-127
Gene type: protein coding
RefSeq status: MODEL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary: Predicted to enable phosphatase regulator activity and protein kinase binding activity. Predicted to act upstream of or within signal transduction. Predicted to be located in cytoplasm. [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: all
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Genomic context

See zmp:0000001167 in Genome Data Viewer

Location:: chromosome: 25

Exon count:: 23

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	25	NC_007136.7 (4581428..4625027)
105	previous assembly	GRCz10 (GCF_000002035.5)	25	NC_007136.6 (4454863..4498477)

Chromosome 25 - NC_007136.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

fc68f09.x1 (e-PCR)
- UniSTS:188223

G47381 (e-PCR)
- UniSTS:108162

fb14d05.x1 (e-PCR)
- UniSTS:202922

SART3_3515 (e-PCR)
- UniSTS:462508

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables phosphatase regulator activity	IEA Inferred from Electronic Annotation more info
enables protein kinase binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within signal transduction	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: protein phosphatase 1 regulatory subunit 12A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

NC_007136.7 Reference GRCz11 Primary Assembly

Range

4581428..4625027

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_068217477.1 → XP_068073578.1 protein phosphatase 1 regulatory subunit 12A isoform X1
XM_002666774.7 → XP_002666820.2 protein phosphatase 1 regulatory subunit 12A isoform X2

UniProtKB/TrEMBL

A0A8M1RMT9

Conserved Domains (4) summary

cd00204
Location:80 → 263

ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...

pfam12796
Location:57 → 149

Ank_2; Ankyrin repeats (3 copies)

pfam15898
Location:789 → 888

PRKG1_interact; cGMP-dependent protein kinase interacting domain

sd00045
Location:57 → 83

ANK; ANK repeat [structural motif]
XM_068217478.1 → XP_068073579.1 protein phosphatase 1 regulatory subunit 12A isoform X3