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    mrrf mitochondrial ribosome recycling factor [ Danio rerio (zebrafish) ]

    Gene ID: 431721, updated on 9-Dec-2024

    Summary

    Official Symbol
    mrrfprovided by ZNC
    Official Full Name
    mitochondrial ribosome recycling factorprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040704-12
    See related
    Ensembl:ENSDARG00000034174 AllianceGenome:ZFIN:ZDB-GENE-040704-12
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:91914
    Summary
    Predicted to enable ribosomal large subunit binding activity. Predicted to be involved in translation. Predicted to be active in mitochondrion. Is expressed in eye; immature eye; midbrain; pharyngeal arch 3-7 skeleton; and somite. Orthologous to human MRRF (mitochondrial ribosome recycling factor). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See mrrf in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 10 NC_007121.7 (9305050..9346293, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 10 NC_007121.6 (9471491..9512734, complement)

    Chromosome 10 - NC_007121.7Genomic Context describing neighboring genes Neighboring gene DNA ligase 1-like Neighboring gene solute carrier family 37 member 4b-like Neighboring gene RNA binding motif protein 18 Neighboring gene uncharacterized LOC110440063 Neighboring gene LIM homeobox 6a

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables ribosomal large subunit binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in translation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within translation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    ribosome-recycling factor, mitochondrial

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001002174.1NP_001002174.1  ribosome-recycling factor, mitochondrial

      See identical proteins and their annotated locations for NP_001002174.1

      Status: PROVISIONAL

      Source sequence(s)
      BC074048
      UniProtKB/TrEMBL
      Q6GMJ7
      Related
      ENSDARP00000039535.4, ENSDART00000039536.5
      Conserved Domains (1) summary
      pfam01765
      Location:98255
      RRF; Ribosome recycling factor

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007121.7 Reference GRCz11 Primary Assembly

      Range
      9305050..9346293 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394770.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      92473..133716 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)