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    fam222aa family with sequence similarity 222 member Aa [ Danio rerio (zebrafish) ]

    Gene ID: 793922, updated on 9-Dec-2024

    Summary

    Official Symbol
    fam222aaprovided by ZNC
    Official Full Name
    family with sequence similarity 222 member Aaprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-050309-42
    See related
    Ensembl:ENSDARG00000090797 AllianceGenome:ZFIN:ZDB-GENE-050309-42
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fam222a; im:7143836; si:dkey-175c11.1
    Summary
    Is expressed in several structures, including margin; nervous system; neural tube; periderm; and tail bud. Orthologous to human FAM222A (family with sequence similarity 222 member A). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See fam222aa in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 5 NC_007116.7 (19657225..19754679)
    105 previous assembly GRCz10 (GCF_000002035.5) 5 NC_007116.6 (19153431..19250866)

    Chromosome 5 - NC_007116.7Genomic Context describing neighboring genes Neighboring gene metabolism of cobalamin associated B Neighboring gene mevalonate kinase Neighboring gene transient receptor potential cation channel, subfamily V, member 4 Neighboring gene glycolipid transfer protein a

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Gene Ontology Provided by ZFIN

    Component Evidence Code Pubs
    is_active_in cellular_component  

    General protein information

    Preferred Names
    protein FAM222A
    Names
    family with sequence similarity 222 member A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001126454.1NP_001119926.1  protein FAM222A

      See identical proteins and their annotated locations for NP_001119926.1

      Status: PROVISIONAL

      Source sequence(s)
      BX546480
      UniProtKB/TrEMBL
      A0A8M2BCF5, B0S6Q6
      Related
      ENSDARP00000121787.1, ENSDART00000131924.2
      Conserved Domains (1) summary
      pfam15258
      Location:37422
      FAM222A; Protein family of FAM222A

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007116.7 Reference GRCz11 Primary Assembly

      Range
      19657225..19754679
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_068221316.1XP_068077417.1  protein FAM222A isoform X1

      UniProtKB/TrEMBL
      A0A8M2BCF5, B0S6Q6
    2. XM_005165186.5XP_005165243.1  protein FAM222A isoform X1

      See identical proteins and their annotated locations for XP_005165243.1

      UniProtKB/TrEMBL
      A0A8M2BCF5, B0S6Q6
      Conserved Domains (1) summary
      pfam15258
      Location:37422
      FAM222A; Protein family of FAM222A
    3. XM_009301360.4XP_009299635.1  protein FAM222A isoform X1

      See identical proteins and their annotated locations for XP_009299635.1

      UniProtKB/TrEMBL
      A0A8M2BCF5, B0S6Q6
      Conserved Domains (1) summary
      pfam15258
      Location:37422
      FAM222A; Protein family of FAM222A
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