ghitm growth hormone inducible transmembrane protein [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: ghitmprovided by ZNC
Official Full Name: growth hormone inducible transmembrane proteinprovided by ZNC
Primary source: ZFIN:ZDB-GENE-040426-1537
See related: AllianceGenome:ZFIN:ZDB-GENE-040426-1537
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:66108; zgc:77363; unm_sa8494
Summary: Predicted to enable calcium channel activity. Predicted to be involved in calcium export from the mitochondrion and inner mitochondrial membrane organization. Predicted to be located in membrane. Predicted to be active in mitochondrial inner membrane. Orthologous to human GHITM (growth hormone inducible transmembrane protein). [provided by Alliance of Genome Resources, Jan 2025]
Annotation information: Annotation category: partial on reference assembly
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 12

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	12	NC_007123.7 (49000313..49033186, complement)
RS_2024_08	current	GRCz11 (GCF_000002035.6)	Unplaced Scaffold	NW_003335146.1 (1..677, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	12	NC_007123.6 (48978784..49011657, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	Unplaced Scaffold	NW_003335146.1 (1..677, complement)

Chromosome 12 - NC_007123.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables calcium channel activity	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
involved_in calcium export from the mitochondrion	IBA Inferred from Biological aspect of Ancestor more info
involved_in inner mitochondrial membrane organization	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info
is_active_in mitochondrial inner membrane	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: growth hormone-inducible transmembrane protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_200591.1 → NP_956885.1 growth hormone-inducible transmembrane protein

See identical proteins and their annotated locations for NP_956885.1

Status: PROVISIONAL

Source sequence(s)

BC056745

UniProtKB/TrEMBL

Q6NYV2

Conserved Domains (1) summary

cd10431
Location:93 → 340

GHITM; Growth-hormone inducible transmembrane protein