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    lmbrd2b LMBR1 domain containing 2b [ Danio rerio (zebrafish) ]

    Gene ID: 335257, updated on 9-Dec-2024

    Summary

    Official Symbol
    lmbrd2bprovided by ZNC
    Official Full Name
    LMBR1 domain containing 2bprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-7197
    See related
    Ensembl:ENSDARG00000017312 AllianceGenome:ZFIN:ZDB-GENE-030131-7197
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fk97a10; zgc:73387; wu:fk97a10
    Summary
    Predicted to be involved in adrenergic receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be active in membrane. Orthologous to human LMBRD2 (LMBR1 domain containing 2). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Genomic context

    See lmbrd2b in Genome Data Viewer
    Location:
    chromosome: 21
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 21 NC_007132.7 (22400962..22422876)
    105 previous assembly GRCz10 (GCF_000002035.5) 21 NC_007132.6 (22364326..22386240)

    Chromosome 21 - NC_007132.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC137488810 Neighboring gene U6 spliceosomal RNA Neighboring gene si:ch73-112l6.1 Neighboring gene calcyphosine-like b Neighboring gene interleukin 7 receptor Neighboring gene myosin VB

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Markers

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in adrenergic receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in adrenergic receptor signaling pathway ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    G-protein coupled receptor-associated protein LMBRD2B
    Names
    LMBR1 domain-containing protein 2-B

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_199944.1NP_956238.1  G-protein coupled receptor-associated protein LMBRD2B

      See identical proteins and their annotated locations for NP_956238.1

      Status: PROVISIONAL

      Source sequence(s)
      BC063324
      UniProtKB/Swiss-Prot
      Q6P4P2
      Related
      ENSDARP00000153367.1, ENSDART00000183455.1
      Conserved Domains (1) summary
      pfam04791
      Location:1555
      LMBR1; LMBR1-like membrane protein

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007132.7 Reference GRCz11 Primary Assembly

      Range
      22400962..22422876
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)