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    yjdP protein YjdP [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 2847754, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yjdP
    Official Full Name
    protein YjdP
    Primary source
    ECOCYC:G0-9541
    Locus tag
    b4487
    See related
    ASAP:ABE-0174120
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK4084
    Summary
    First 22 aa are predicted to be a type I signal peptide. yjdP is annotated on the opposite strand of the now defunct phnQ. [More information is available at EcoGene: EG14407]. A hypothetical protein, PhnQ, encoded on the opposite strand was originally thought to be part of the phn operon . [More information is available at EcoCyc: G0-9541].
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    Genomic context

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    Sequence:
    NC_000913.3 (4313868..4314197)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene DNA-binding transcriptional repressor AlsR Neighboring gene allose-6-phosphate isomerase/ribose-5-phosphate isomerase B Neighboring gene 5-phospho-alpha-D-ribosyl 1,2-cyclic phosphate phosphodiesterase Neighboring gene aminoalkylphosphonate N-acetyltransferase Neighboring gene ribose 1,5-bisphosphate phosphokinase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Involvement of the Escherichia coli phn (psiD) gene cluster in assimilation of phosphorus in the form of phosphonates, phosphite, Pi esters, and Pi. Metcalf WW, et al. J Bacteriol, 1991 Jan. PMID 1846145, Free PMC Article
    2. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    3. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
    4. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    protein YjdP

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4313868..4314197
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_026281.1 protein YjdP [Escherichia coli str. K-12 substr. MG1655]

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q6BEX5
    Nucleotide Protein
    Heading Accession and Version

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