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    RpL34b Ribosomal protein L34b [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 41120, updated on 9-Dec-2024

    Summary

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    Official Symbol
    RpL34bprovided by FlyBase
    Official Full Name
    Ribosomal protein L34bprovided by FlyBase
    Primary source
    FLYBASE:FBgn0037686
    Locus tag
    Dmel_CG9354
    See related
    AllianceGenome:FB:FBgn0037686
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    anon-EST:fe1C10; anon-EST:fe1E8; CG9354; Dmel\CG9354; L34b; Rp L34b; RpL34
    Summary
    A structural constituent of ribosome. Predicted to be involved in ribosome biogenesis. Located in cytosolic ribosome. Is expressed in adult head; adult heart; and organism. Orthologous to human RPL34 (ribosomal protein L34). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See RpL34b in Genome Data Viewer
    Location:
    85D15-85D15; 3-48 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (9400237..9401226, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (5225959..5226948, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Odorant receptor 85f Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene BBSome interacting protein 1 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Deletion of Drosophila Nopp140 induces subcellular ribosomopathies. He F, et al. Chromosoma, 2015 Jun. PMID 25384888
    2. Loss of Drosophila nucleostemin 2 (NS2) blocks nucleolar release of the 60S subunit leading to ribosome stress. Wang Y, et al. Chromosoma, 2017 Jun. PMID 27150106
    3. Opbp is a new architectural/insulator protein required for ribosomal gene expression. Zolotarev N, et al. Nucleic Acids Res, 2017 Dec 1. PMID 29036346, Free PMC Article
    4. Ribosome heterogeneity in Drosophila melanogaster gonads through paralog-switching. Hopes T, et al. Nucleic Acids Res, 2022 Feb 28. PMID 34283226, Free PMC Article
    5. The LARK RNA-binding protein selectively regulates the circadian eclosion rhythm by controlling E74 protein expression. Huang Y, et al. PLoS One, 2007 Oct 31. PMID 17971870, Free PMC Article

    See all (46) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables structural constituent of ribosome HDA PubMed 
    enables structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables structural constituent of ribosome TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoplasmic translation IC
    Inferred by Curator
    more info
    		 PubMed 
    involved_in cytoplasmic translation TAS
    Traceable Author Statement
    more info
    		 PubMed 
    involved_in ribosome biogenesis IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of cytosolic large ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of cytosolic large ribosomal subunit TAS
    Traceable Author Statement
    more info
    		 PubMed 
    located_in cytosolic ribosome HDA PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    ribosomal protein L34b
    Names
    CG9354-PA
    CG9354-PB
    CG9354-PC
    CG9354-PD
    RpL34b-PA
    RpL34b-PB
    RpL34b-PC
    RpL34b-PD
    anon-fast-evolving-1C10
    anon-fast-evolving-1E8

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      9400237..9401226 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_169277.2 → NP_731345.1  ribosomal protein L34b, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_731345.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VHE5
      Related
      FBpp0081527
      Conserved Domains (1) summary
      pfam01199
      Location:1 → 94
      Ribosomal_L34e; Ribosomal protein L34e

    2. NM_001300321.1 → NP_001287250.1  ribosomal protein L34b, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001287250.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VHE5
      Conserved Domains (1) summary
      pfam01199
      Location:1 → 94
      Ribosomal_L34e; Ribosomal protein L34e

    3. NM_141630.2 → NP_649887.1  ribosomal protein L34b, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_649887.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VHE5
      Related
      FBpp0081528
      Conserved Domains (1) summary
      pfam01199
      Location:1 → 94
      Ribosomal_L34e; Ribosomal protein L34e

    4. NM_001300320.1 → NP_001287249.1  ribosomal protein L34b, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001287249.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VHE5
      Conserved Domains (1) summary
      pfam01199
      Location:1 → 94
      Ribosomal_L34e; Ribosomal protein L34e
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VHE5 Q9VHE5

    Gene LinkOut

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