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    beat-Ib beaten path Ib [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 34939, updated on 9-Dec-2024

    Summary

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    Official Symbol
    beat-Ibprovided by FlyBase
    Official Full Name
    beaten path Ibprovided by FlyBase
    Primary source
    FLYBASE:FBgn0028645
    Locus tag
    Dmel_CG7644
    See related
    AllianceGenome:FB:FBgn0028645
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:RE51929; beat Ib; beat-1b; beat-B; Beat-Ib; BG:DS00365.4; CG7644; CT23325; Dmel\CG7644
    Summary
    Predicted to be involved in heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules and motor neuron axon guidance. Predicted to be located in plasma membrane. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See beat-Ib in Genome Data Viewer
    Location:
    35D6-35D7; 2-51 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (15905134..15962435, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (15905134..15962435, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR44867 Neighboring gene long non-coding RNA:CR44868 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR43803 Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR43412 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Immunoglobulin superfamily beat-Ib mediates intestinal regeneration induced by reactive oxygen species in Drosophila. Nagai H, et al. Genes Cells, 2020 May. PMID 32080940
    2. Axon guidance genes modulate neurotoxicity of ALS-associated UBQLN2. Kim SH, et al. Elife, 2023 Apr 11. PMID 37039476, Free PMC Article
    3. Combining genome-wide methods to investigate the genetic complexity of courtship song variation in Drosophila melanogaster. Turner TL, et al. Mol Biol Evol, 2013 Sep. PMID 23777628, Free PMC Article
    4. The Beat generation: a multigene family encoding IgSF proteins related to the Beat axon guidance molecule in Drosophila. Pipes GC, et al. Development, 2001 Nov. PMID 11714679
    5. Deconstruction of the beaten Path-Sidestep interaction network provides insights into neuromuscular system development. Li H, et al. Elife, 2017 Aug 15. PMID 28829740, Free PMC Article

    See all (37) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    mobile_element

    • Loc: c15923189-15922917 mobile_element_type = transposon:INE-1{}2841

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    involved_in motor neuron axon guidance IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    beaten path Ib
    Names
    CG7644-PA
    CG7644-PB
    beat-Ib-PA
    beat-Ib-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      15905134..15962435 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_078855.4 → NP_523579.1  beaten path Ib, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_523579.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MS18, Q9BMH0, Q9VJM9
      Related
      FBpp0080366
      Conserved Domains (1) summary
      cl11960
      Location:160 → 182
      Ig; Immunoglobulin domain

    2. NM_001169516.2 → NP_001162987.1  beaten path Ib, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001162987.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MS18, Q9BMH0, Q9VJM9
      Conserved Domains (1) summary
      cl11960
      Location:160 → 182
      Ig; Immunoglobulin domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8MS18 Q8MS18
    Q9VJM9 Q9VJM9

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