U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Fam151b family with sequence similarity 151, member B [ Rattus norvegicus (Norway rat) ]

    Gene ID: 499507, updated on 27-Nov-2024

    Summary

    Official Symbol
    Fam151bprovided by RGD
    Official Full Name
    family with sequence similarity 151, member Bprovided by RGD
    Primary source
    RGD:1561110
    See related
    EnsemblRapid:ENSRNOG00000024136 AllianceGenome:RGD:1561110
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1561110
    Summary
    Predicted to be involved in photoreceptor cell development. Predicted to be active in extracellular space. Orthologous to human FAM151B (family with sequence similarity 151 member B). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in Adrenal (RPKM 46.8), Brain (RPKM 36.8) and 9 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Fam151b in Genome Data Viewer
    Location:
    2q12
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 2 NC_086020.1 (25409382..25446225, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 2 NC_051337.1 (23674317..23710420, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 2 NC_005101.4 (22023038..22059166, complement)

    Chromosome 2 - NC_086020.1Genomic Context describing neighboring genes Neighboring gene dihydrofolate reductase Neighboring gene ankyrin repeat domain 34B Neighboring gene zinc finger FYVE-type containing 16 Neighboring gene spermatogenic leucine zipper 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001134748.1NP_001128220.1  protein FAM151B

      See identical proteins and their annotated locations for NP_001128220.1

      Status: PROVISIONAL

      Source sequence(s)
      BC167070
      UniProtKB/TrEMBL
      A0A8I6AFQ9, A6I4R1, B2RZ92, F7EMX6
      Related
      ENSRNOP00000032254.5, ENSRNOT00000031909.7
      Conserved Domains (1) summary
      pfam10223
      Location:29263
      DUF2181; Uncharacterized conserved protein (DUF2181)

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086020.1 Reference GRCr8

      Range
      25409382..25446225 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063282342.1XP_063138412.1  protein FAM151B isoform X7

    2. XM_063282336.1XP_063138406.1  protein FAM151B isoform X2

      UniProtKB/TrEMBL
      A6I4R0
    3. XM_063282337.1XP_063138407.1  protein FAM151B isoform X3

    4. XM_063282340.1XP_063138410.1  protein FAM151B isoform X6

    5. XM_063282338.1XP_063138408.1  protein FAM151B isoform X4

    6. XM_063282339.1XP_063138409.1  protein FAM151B isoform X5

    7. XM_039102823.2XP_038958751.1  protein FAM151B isoform X1

      UniProtKB/TrEMBL
      A0A8I6AFQ9
      Related
      ENSRNOP00000091224.2, ENSRNOT00000114357.2
      Conserved Domains (1) summary
      pfam10223
      Location:11245
      DUF2181; Uncharacterized conserved protein (DUF2181)