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    GH9B8 glycosyl hydrolase 9B8 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817861, updated on 18-Sep-2024

    Summary

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    Official Symbol
    GH9B8
    Official Full Name
    glycosyl hydrolase 9B8
    Primary source
    TAIR:AT2G32990
    Locus tag
    AT2G32990
    See related
    Araport:AT2G32990
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtGH9B8; glycosyl hydrolase 9B8; T21L14.7; T21L14_7
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    Genomic context

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    See GH9B8 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    4
    Sequence:
    Chromosome: 2; NC_003071.7 (14003128..14006065)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene G1/S-specific cyclin-E protein Neighboring gene HAUS augmin-like complex subunit Neighboring gene ubiquitin-associated (UBA)/TS-N domain-containing protein-like protein Neighboring gene Ubiquitin-associated (UBA) protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_128859.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables cellulase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    glycosyl hydrolase 9B8
    NP_180858.1
    • glycosyl hydrolase 9B8 (GH9B8); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9C2 (TAIR:AT1G64390.1); Has 1753 Blast hits to 1740 proteins in 252 species: Archae - 2; Bacteria - 582; Metazoa - 189; Fungi - 17; Plants - 922; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      14003128..14006065
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128859.3 → NP_180858.1  glycosyl hydrolase 9B8 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180858.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O48766
      UniProtKB/TrEMBL
      A0A178VQS9, A0A5S9X3E1
      Conserved Domains (1) summary
      PLN02420
      Location:1 → 523
      PLN02420; endoglucanase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O48766.1

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