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    DNA repair metallo-beta-lactamase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838484, updated on 18-Sep-2024

    Summary

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    Official Full Name
    DNA repair metallo-beta-lactamase family protein
    Primary source
    TAIR:AT1G19025
    Locus tag
    AT1G19025
    See related
    Araport:AT1G19025
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (6568674..6570939)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene myosin-binding protein, putative (Protein of unknown function, DUF593) Neighboring gene Homeodomain-like superfamily protein Neighboring gene uncharacterized protein Neighboring gene CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase Neighboring gene pseudo Neighboring gene NAC (No Apical Meristem) domain transcriptional regulator superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001332383.1
    NM_101760.2

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    DNA repair metallo-beta-lactamase family protein
    NP_564070.1
    • DNA repair metallo-beta-lactamase family protein; CONTAINS InterPro DOMAIN/s: DNA repair metallo-beta-lactamase (InterPro:IPR011084); BEST Arabidopsis thaliana protein match is: DNA repair metallo-beta-lactamase family protein (TAIR:AT1G27410.1); Has 1078 Blast hits to 1060 proteins in 342 species: Archae - 34; Bacteria - 280; Metazoa - 259; Fungi - 220; Plants - 166; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      6568674..6570939
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001332382.1 → NP_001321878.1  DNA repair metallo-beta-lactamase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ASD8, Q8LCG8

    2. NM_101760.2 → NP_564070.1  DNA repair metallo-beta-lactamase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564070.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654ED26, A0A7G2DXA4, F4IDZ7
      Conserved Domains (2) summary
      pfam07522
      Location:232 → 347
      DRMBL; DNA repair metallo-beta-lactamase
      cl23716
      Location:7 → 159
      metallo-hydrolase-like_MBL-fold; mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain

    3. NM_001332383.1 → NP_001321877.1  DNA repair metallo-beta-lactamase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ASA0
    Nucleotide Protein
    Heading Accession and Version

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