U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    FAF4 FANTASTIC four-like protein (DUF3049) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819773, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    FAF4
    Official Full Name
    FANTASTIC four-like protein (DUF3049)
    Primary source
    TAIR:AT3G06020
    Locus tag
    AT3G06020
    See related
    Araport:AT3G06020
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F2O10.2; F2O10_2; FANTASTIC FOUR 4
    Summary
    A member of the FAF family proteins encoded by the FANTASTIC FOUR (FAF) genes: AT4G02810 (FAF1), AT1G03170 (FAF2), AT5G19260 (FAF3) and AT3G06020 (FAF4). FAFs have the potential to regulate shoot meristem size in Arabidopsis thaliana. FAFs can repress WUS, which ultimately leads to an arrest of meristem activity in FAF overexpressing lines.
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See FAF4 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    1
    Sequence:
    Chromosome: 3; NC_003074.8 (1813164..1814363)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene RNI-like superfamily protein Neighboring gene SNF2/Brahma-type chromatin-remodeling protein CHR12 Neighboring gene uncharacterized protein Neighboring gene NPK1-related protein kinase 3 Neighboring gene Glycoprotein membrane precursor GPI-anchored

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. The FANTASTIC FOUR proteins influence shoot meristem size in Arabidopsis thaliana. Wahl V, et al. BMC Plant Biol, 2010 Dec 22. PMID 21176196, Free PMC Article
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    NM_111476.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of meristem growth IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    FANTASTIC four-like protein (DUF3049)
    NP_187253.1
    • Protein of unknown function (DUF3049); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3049 (InterPro:IPR021410); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3049) (TAIR:AT5G19260.1); Has 5181 Blast hits to 1744 proteins in 177 species: Archae - 19; Bacteria - 80; Metazoa - 2761; Fungi - 308; Plants - 233; Viruses - 99; Other Eukaryotes - 1681 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      1813164..1814363
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111476.2 → NP_187253.1  FANTASTIC four-like protein (DUF3049) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187253.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SFG6
      UniProtKB/TrEMBL
      A0A5S9X9V0, A0A654F664
      Conserved Domains (1) summary
      pfam11250
      Location:166 → 215
      FAF; Fantastic Four meristem regulator
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SFG6.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools