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    ORP4C OSBP(oxysterol binding protein)-related protein 4C [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835830, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ORP4C
    Official Full Name
    OSBP(oxysterol binding protein)-related protein 4C
    Primary source
    TAIR:AT5G57240
    Locus tag
    AT5G57240
    See related
    Araport:AT5G57240
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MJB24.5; MJB24_5; OSBP(oxysterol binding protein)-related protein 4C
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    Genomic context

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    See ORP4C in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    6
    Sequence:
    Chromosome: 5; NC_003076.8 (23192872..23195476)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene cytochrome P450, family 81, subfamily F, polypeptide 2 Neighboring gene Thioredoxin superfamily protein Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein Neighboring gene cytochrome P450, family 71, subfamily B, polypeptide 10 Neighboring gene Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001037011.2
    NM_001345250.1
    NM_001345251.1
    NM_001345252.1
    NM_125106.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables lipid binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    OSBP(oxysterol binding protein)-related protein 4C
    NP_001032088.1
    • OSBP(oxysterol binding protein)-related protein 4C (ORP4C); FUNCTIONS IN: oxysterol binding; INVOLVED IN: steroid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oxysterol-binding protein, conserved site (InterPro:IPR018494), Oxysterol-binding protein (InterPro:IPR000648); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 4B (TAIR:AT4G25850.1); Has 2168 Blast hits to 2165 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 1089; Fungi - 634; Plants - 225; Viruses - 0; Other Eukaryotes - 220 (source: NCBI BLink).
    NP_200534.1
    • OSBP(oxysterol binding protein)-related protein 4C (ORP4C); FUNCTIONS IN: oxysterol binding; INVOLVED IN: steroid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oxysterol-binding protein, conserved site (InterPro:IPR018494), Oxysterol-binding protein (InterPro:IPR000648); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 4B (TAIR:AT4G25850.1); Has 2168 Blast hits to 2165 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 1089; Fungi - 634; Plants - 225; Viruses - 0; Other Eukaryotes - 220 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      23192872..23195476
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_125106.3 → NP_200534.1  OSBP(oxysterol binding protein)-related protein 4C [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200534.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LVD4
      UniProtKB/TrEMBL
      A0A654GBR5
      Conserved Domains (1) summary
      pfam01237
      Location:30 → 352
      Oxysterol_BP; Oxysterol-binding protein

    2. NM_001345250.1 → NP_001329986.1  OSBP(oxysterol binding protein)-related protein 4C [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UJK2, A0A1P8B9E6, A0A384LHK8, A0A654GBR5

    3. NM_001345251.1 → NP_001329984.1  OSBP(oxysterol binding protein)-related protein 4C [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UJK2, A0A1P8B9E6, A0A384LHK8, A0A654GBR5

    4. NM_001345252.1 → NP_001329985.1  OSBP(oxysterol binding protein)-related protein 4C [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LVD4
      UniProtKB/TrEMBL
      A0A654GBR5
      Conserved Domains (1) summary
      pfam01237
      Location:30 → 352
      Oxysterol_BP; Oxysterol-binding protein

    5. NM_001037011.2 → NP_001032088.1  OSBP(oxysterol binding protein)-related protein 4C [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001032088.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LVD4
      UniProtKB/TrEMBL
      A0A654GBR5
      Conserved Domains (1) summary
      pfam01237
      Location:30 → 352
      Oxysterol_BP; Oxysterol-binding protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LVD4.1

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