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    PUT1 Amino acid permease family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 840072, updated on 18-Sep-2024

    Summary

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    Official Symbol
    PUT1
    Official Full Name
    Amino acid permease family protein
    Primary source
    TAIR:AT1G31820
    Locus tag
    AT1G31820
    See related
    Araport:AT1G31820
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    POLYAMINE UPTAKE TRANSPORTER 1
    Summary
    Encodes POLYAMINE UPTAKE TRANSPORTER 1, an amino acid permease family protein.
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    Genomic context

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    See PUT1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (11416451..11418464, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene FRIGIDA like 2 Neighboring gene Ribosomal L18p/L5e family protein Neighboring gene Amino acid permease family protein Neighboring gene uncharacterized protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Kinetic and phylogenetic analysis of plant polyamine uptake transporters. Mulangi V, et al. Planta, 2012 Oct. PMID 22711282
    2. Uncovering Arabidopsis membrane protein interactome enriched in transporters using mating-based split ubiquitin assays and classification models. Chen J, et al. Front Plant Sci, 2012. PMID 22737156, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_102919.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables basic amino acid transmembrane transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables polyamine transmembrane transporter activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables polyamine transmembrane transporter activity IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within polyamine transport IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Amino acid permease family protein
    NP_174465.1
    • Amino acid permease family protein; FUNCTIONS IN: cationic amino acid transmembrane transporter activity; INVOLVED IN: transport, amino acid transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: Amino acid permease family protein (TAIR:AT1G31830.1); Has 24659 Blast hits to 24648 proteins in 2148 species: Archae - 328; Bacteria - 21417; Metazoa - 747; Fungi - 1081; Plants - 444; Viruses - 0; Other Eukaryotes - 642 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      11416451..11418464 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_102919.4 → NP_174465.1  Amino acid permease family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_174465.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9C6S4
      UniProtKB/TrEMBL
      A0A178WEC0
      Conserved Domains (1) summary
      pfam13520
      Location:36 → 443
      AA_permease_2; Amino acid permease
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9C6S4.1

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