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    T19H12.2 Acidic leucine-rich nuclear phosphoprotein 32-related protein 2 [ Caenorhabditis elegans ]

    Gene ID: 178881, updated on 9-Dec-2024

    Summary

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    Official Symbol
    T19H12.2
    Official Full Name
    Acidic leucine-rich nuclear phosphoprotein 32-related protein 2
    Primary source
    WormBase:WBGene00020588
    Locus tag
    CELE_T19H12.2
    See related
    AllianceGenome:WB:WBGene00020588
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable histone binding activity. Predicted to be active in nucleus. Is expressed in germ line. Orthologous to human ANP32B (acidic nuclear phosphoprotein 32 family member B); ANP32CP (acidic nuclear phosphoprotein 32 family member C, pseudogene); and ANP32E (acidic nuclear phosphoprotein 32 family member E). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See T19H12.2 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    3
    Sequence:
    Chromosome: V; NC_003283.11 (4890429..4891422)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Secreted salivary protein Neighboring gene glucuronosyltransferase Neighboring gene glucuronosyltransferase Neighboring gene glucuronosyltransferase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
    2. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables histone binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Acidic leucine-rich nuclear phosphoprotein 32-related protein 2
    NP_504310.2
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      4890429..4891422
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_071909.7 → NP_504310.2  Acidic leucine-rich nuclear phosphoprotein 32-related protein 2 [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O01615
      Conserved Domains (3) summary
      COG4886
      Location:22 → 129
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00031
      Location:22 → 42
      LRR_1; leucine-rich repeat [structural motif]
      pfam13855
      Location:92 → 147
      LRR_8; Leucine rich repeat
    Nucleotide Protein
    Heading Accession and Version

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