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    • Showing Current items.

    Y106G6G.2 SEC7 domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 172898, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Y106G6G.2
    Official Full Name
    SEC7 domain-containing protein
    Primary source
    WormBase:WBGene00013711
    Locus tag
    CELE_Y106G6G.2
    See related
    AllianceGenome:WB:WBGene00013711
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable guanyl-nucleotide exchange factor activity. Predicted to be involved in regulation of ARF protein signal transduction. Orthologous to human ARFGEF3 (ARFGEF family member 3). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See Y106G6G.2 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    26
    Sequence:
    Chromosome: I; NC_003279.8 (10300568..10327870, complement)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene 63 kDa sperm flagellar membrane protein Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene Serine/threonine-protein kinase WARTS homolog Neighboring gene CAP-Gly domain-containing linker protein 1-like;Leucine zipper protein 1;Si:ch211-1a19.3 Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene ncRNA Neighboring gene Teneurin-m Neighboring gene Dynein light chain Neighboring gene DUF4477 domain-containing protein Neighboring gene Small ribosomal subunit protein eS7

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables guanyl-nucleotide exchange factor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of ARF protein signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    SEC7 domain-containing protein
    NP_001350967.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      10300568..10327870 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001364056.3 → NP_001350967.1  SEC7 domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      O18093
      Conserved Domains (2) summary
      smart00222
      Location:408 → 609
      Sec7; Sec7 domain
      pfam09324
      Location:960 → 1038
      DUF1981; Domain of unknown function (DUF1981)
    Nucleotide Protein
    Heading Accession and Version

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