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    mip-1 HTH OST-type domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 175635, updated on 9-Dec-2024

    Summary

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    Official Symbol
    mip-1
    Official Full Name
    HTH OST-type domain-containing protein
    Primary source
    WormBase:WBGene00008005
    Locus tag
    CELE_C38D4.4
    See related
    AllianceGenome:WB:WBGene00008005
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Is expressed in several structures, including P0; Psub1; Psub2; Psub3; and Psub4. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See mip-1 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    8
    Sequence:
    Chromosome: III; NC_003281.10 (4793086..4795423)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene ENhancer of Uncoordination Neighboring gene Protein mel-28 Neighboring gene Rho-GAP domain-containing protein;WW domain-containing protein tag-325 Neighboring gene rRNA N(6)-adenosine-methyltransferase metl-5 Neighboring gene Homeobox protein pal-1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. C. elegans germ granules sculpt both germline and somatic RNAome. Price IF, et al. Nat Commun, 2023 Sep 25. PMID 37749091, Free PMC Article
    2. GLH/VASA helicases promote germ granule formation to ensure the fidelity of piRNA-mediated transcriptome surveillance. Chen W, et al. Nat Commun, 2022 Sep 9. PMID 36085149, Free PMC Article
    3. System-wide mapping of peptide-GPCR interactions in C. elegans. Beets I, et al. Cell Rep, 2023 Sep 26. PMID 37656621, Free PMC Article
    4. A modified TurboID approach identifies tissue-specific centriolar components in C. elegans. Holzer E, et al. PLoS Genet, 2022 Apr. PMID 35442950, Free PMC Article
    5. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    HTH OST-type domain-containing protein
    NP_497988.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      4793086..4795423
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_065587.7 → NP_497988.1  HTH OST-type domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_497988.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q18509
    Nucleotide Protein
    Heading Accession and Version

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