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    B0281.3 RING-type domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 181897, updated on 9-Dec-2024

    Summary

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    Official Symbol
    B0281.3
    Official Full Name
    RING-type domain-containing protein
    Primary source
    WormBase:WBGene00015110
    Locus tag
    CELE_B0281.3
    See related
    AllianceGenome:WB:WBGene00015110
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable zinc ion binding activity. Orthologous to several human genes including TRIM59 (tripartite motif containing 59). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See B0281.3 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    6
    Sequence:
    Chromosome: II; NC_003280.10 (2307041..2308352)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene BTB domain-containing protein Neighboring gene BTB domain-containing protein Neighboring gene pseudo Neighboring gene E3 ubiquitin-protein ligase trim-21

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    RING-type domain-containing protein
    NP_494232.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      2307041..2308352
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_061831.6 → NP_494232.2  RING-type domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_494232.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      O16614
      Conserved Domains (3) summary
      COG3883
      Location:137 → 221
      CwlO1; Uncharacterized N-terminal domain of peptidoglycan hydrolase CwlO [Function unknown]
      cd19774
      Location:87 → 136
      Bbox2_TRIM23_C-IX_rpt2; second B-box-type 2 zinc finger found in tripartite motif-containing protein 23 (TRIM23) and similar proteins
      cl17238
      Location:4 → 51
      RING_Ubox; RING finger (Really Interesting New Gene) domain and U-box domain superfamily
    Nucleotide Protein
    Heading Accession and Version

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