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    MUSK muscle associated receptor tyrosine kinase [ Homo sapiens (human) ]

    Gene ID: 4593, updated on 27-Nov-2024

    Summary

    Official Symbol
    MUSKprovided by HGNC
    Official Full Name
    muscle associated receptor tyrosine kinaseprovided by HGNC
    Primary source
    HGNC:HGNC:7525
    See related
    Ensembl:ENSG00000030304 MIM:601296; AllianceGenome:HGNC:7525
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    CMS9; FADS; FADS1
    Summary
    This gene encodes a muscle-specific tyrosine kinase receptor. The encoded protein may play a role in clustering of the acetylcholine receptor in the postsynaptic neuromuscular junction. Mutations in this gene have been associated with congenital myasthenic syndrome. Alternatively spliced transcript variants have been described.[provided by RefSeq, Oct 2009]
    Expression
    Low expression observed in reference dataset See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See MUSK in Genome Data Viewer
    Location:
    9q31.3
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (110668791..110806558)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (122838447..122978207)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (113431071..113568838)

    Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124902247 Neighboring gene uncharacterized LOC105376218 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_105200 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_105219 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_105225 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_105248 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_105271 Neighboring gene NANOG hESC enhancer GRCh37_chr9:113455510-113456011 Neighboring gene NANOG hESC enhancer GRCh37_chr9:113490321-113490840 Neighboring gene Sharpr-MPRA regulatory region 6532 Neighboring gene ribosomal protein S21 pseudogene 5 Neighboring gene uncharacterized LOC107987115 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr9:113544666-113545865 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:113553096-113553668 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28787 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28788 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_105418 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_105435 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_105449 Neighboring gene lysophosphatidic acid receptor 1 Neighboring gene RNA, U6 small nuclear 432, pseudogene Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_105469 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28789 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28790 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28791 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20175 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:113715081-113715580 Neighboring gene uncharacterized LOC124902248 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20176

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Phenotypes

    Associated conditions

    Description Tests
    Congenital myasthenic syndrome 9 Compare labs
    Fetal akinesia deformation sequence 1
    MedGen: C1276035 OMIM: 208150 GeneReviews: Not available
    Compare labs

    EBI GWAS Catalog

    Description
    Exploring genome-wide - dietary heme iron intake interactions and the risk of type 2 diabetes.
    EBI GWAS Catalog
    Genome-wide association study of lung function decline in adults with and without asthma.
    EBI GWAS Catalog

    HIV-1 interactions

    Protein interactions

    Protein Gene Interaction Pubs
    Pr55(Gag) gag The amplified luminescent proximity homogeneous assay (AlphaScreen) identifies the interaction of HIV-1 Gag with MUSK PubMed

    Go to the HIV-1, Human Interaction Database

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Clone Names

    • MGC126323, MGC126324

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables GPI-linked ephrin receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables Wnt-protein binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables boss receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables brain-derived neurotrophic factor receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables epidermal growth factor receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables fibroblast growth factor receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables hepatocyte growth factor receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables histone H2AXY142 kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables histone H3Y41 kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables insulin receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables insulin-like growth factor receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables macrophage colony-stimulating factor receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables placental growth factor receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables platelet-derived growth factor alpha-receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables platelet-derived growth factor beta-receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein tyrosine kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables protein tyrosine kinase collagen receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables stem cell factor receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables transmembrane receptor protein tyrosine kinase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables transmembrane-ephrin receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables vascular endothelial growth factor receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in Kit signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in brain-derived neurotrophic factor receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in cell differentiation IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in cell surface receptor protein tyrosine kinase signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in chromatin remodeling IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in collagen-activated tyrosine kinase receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in ephrin receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in epidermal growth factor receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in fibroblast growth factor receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in hepatocyte growth factor receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in insulin receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in insulin-like growth factor receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in macrophage colony-stimulating factor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in memory ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in multicellular organism development IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in neuromuscular junction development IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in neuromuscular junction development ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in platelet-derived growth factor receptor-alpha signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in platelet-derived growth factor receptor-beta signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in positive regulation of gene expression ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in positive regulation of protein geranylgeranylation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in positive regulation of protein phosphorylation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of protein phosphorylation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in protein autophosphorylation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in regulation of synaptic assembly at neuromuscular junction ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in skeletal muscle acetylcholine-gated channel clustering ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in vascular endothelial growth factor receptor-1 signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in vascular endothelial growth factor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in neuromuscular junction ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in postsynaptic membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    part_of receptor complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of receptor complex IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    muscle, skeletal receptor tyrosine-protein kinase
    Names
    muscle, skeletal, receptor tyrosine kinase
    muscle-specific kinase receptor
    muscle-specific tyrosine-protein kinase receptor
    NP_001159752.1
    NP_001159753.1
    NP_001356327.1
    NP_005583.1
    XP_005252051.1
    XP_005252052.1
    XP_005252053.1
    XP_011517010.1
    XP_016870223.1
    XP_054218968.1
    XP_054218969.1
    XP_054218970.1
    XP_054218971.1
    XP_054218972.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_016016.2 RefSeqGene

      Range
      5001..142768
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001166280.2NP_001159752.1  muscle, skeletal receptor tyrosine-protein kinase isoform 2

      See identical proteins and their annotated locations for NP_001159752.1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (2) contains an alternate in-frame exon and lacks an alternate in-frame exon in the middle portion of the coding region compared to variant 1. The encoded isoform (2) is shorter than isoform 1.
      Source sequence(s)
      AL157881, AL513328
      Consensus CDS
      CCDS75874.1
      UniProtKB/Swiss-Prot
      O15146
      Related
      ENSP00000189978.6, ENST00000189978.10
      Conserved Domains (4) summary
      cd05050
      Location:483772
      PTKc_Musk; Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase
      pfam07679
      Location:121203
      I-set; Immunoglobulin I-set domain
      pfam13927
      Location:223296
      Ig_3; Immunoglobulin domain
      cl02447
      Location:317379
      CRD_FZ; CRD_domain cysteine-rich domain, also known as Fz (frizzled) domain
    2. NM_001166281.2NP_001159753.1  muscle, skeletal receptor tyrosine-protein kinase isoform 3

      See identical proteins and their annotated locations for NP_001159753.1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (3) lacks an alternate in-frame exon in the middle portion of the coding region compared to variant 1. The encoded isoform (3) is shorter than isoform 1.
      Source sequence(s)
      AL157881, AL513328
      UniProtKB/Swiss-Prot
      O15146
      Conserved Domains (6) summary
      cd05050
      Location:473762
      PTKc_Musk; Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase
      cd00096
      Location:229296
      Ig; Immunoglobulin domain
      pfam07679
      Location:121208
      I-set; Immunoglobulin I-set domain
      pfam07714
      Location:479760
      Pkinase_Tyr; Protein tyrosine kinase
      cl02447
      Location:307369
      CRD_FZ; CRD_domain cysteine-rich domain, also known as Fz (frizzled) domain
      cl11960
      Location:135201
      Ig; Immunoglobulin domain
    3. NM_001369398.1NP_001356327.1  muscle, skeletal receptor tyrosine-protein kinase isoform 4

      Status: REVIEWED

      Description
      Transcript Variant: This variant (4) represents use of an alternate promoter and therefore differs in the 5' UTR and 5' coding region, compared to variant 1. These differences cause translation initiation at a downstream start codon and result in an isoform (4) with a shorter N-terminus, compared to isoform 1.
      Source sequence(s)
      AL157881, AL513328
      Conserved Domains (2) summary
      cd05050
      Location:149438
      PTKc_Musk; Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase
      cl02447
      Location:145
      CRD_FZ; CRD_domain cysteine-rich domain, also known as Fz (frizzled) domain
    4. NM_005592.4NP_005583.1  muscle, skeletal receptor tyrosine-protein kinase isoform 1 precursor

      See identical proteins and their annotated locations for NP_005583.1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
      Source sequence(s)
      AL157881, AL513328
      Consensus CDS
      CCDS48005.1
      UniProtKB/Swiss-Prot
      O15146, Q32MJ8, Q32MJ9, Q5VZW7, Q5VZW8
      Related
      ENSP00000363571.4, ENST00000374448.9
      Conserved Domains (6) summary
      cd05050
      Location:569858
      PTKc_Musk; Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase
      cd00096
      Location:229296
      Ig; Immunoglobulin domain
      pfam07679
      Location:121208
      I-set; Immunoglobulin I-set domain
      pfam07714
      Location:575856
      Pkinase_Tyr; Protein tyrosine kinase
      cl02447
      Location:315457
      CRD_FZ; CRD_domain cysteine-rich domain, also known as Fz (frizzled) domain
      cl11960
      Location:135201
      Ig; Immunoglobulin domain

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

      Range
      110668791..110806558
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005251994.4XP_005252051.1  muscle, skeletal receptor tyrosine-protein kinase isoform X1

      Conserved Domains (6) summary
      cd05050
      Location:579868
      PTKc_Musk; Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase
      cd00096
      Location:239306
      Ig; Immunoglobulin domain
      pfam07679
      Location:121203
      I-set; Immunoglobulin I-set domain
      pfam07714
      Location:585866
      Pkinase_Tyr; Protein tyrosine kinase
      cl02447
      Location:325467
      CRD_FZ; CRD_domain cysteine-rich domain, also known as Fz (frizzled) domain
      cl11960
      Location:135201
      Ig; Immunoglobulin domain
    2. XM_005251995.4XP_005252052.1  muscle, skeletal receptor tyrosine-protein kinase isoform X2

      Conserved Domains (6) summary
      cd05050
      Location:571860
      PTKc_Musk; Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase
      cd00096
      Location:239306
      Ig; Immunoglobulin domain
      pfam07679
      Location:121203
      I-set; Immunoglobulin I-set domain
      pfam07714
      Location:577858
      Pkinase_Tyr; Protein tyrosine kinase
      cl02447
      Location:325467
      CRD_FZ; CRD_domain cysteine-rich domain, also known as Fz (frizzled) domain
      cl11960
      Location:135201
      Ig; Immunoglobulin domain
    3. XM_017014734.2XP_016870223.1  muscle, skeletal receptor tyrosine-protein kinase isoform X4

    4. XM_005251996.4XP_005252053.1  muscle, skeletal receptor tyrosine-protein kinase isoform X3

      UniProtKB/TrEMBL
      A0A087WSY1
      Related
      ENSP00000393608.3, ENST00000416899.7
      Conserved Domains (6) summary
      cd05050
      Location:561850
      PTKc_Musk; Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase
      cd00096
      Location:229296
      Ig; Immunoglobulin domain
      pfam07679
      Location:121208
      I-set; Immunoglobulin I-set domain
      pfam07714
      Location:567848
      Pkinase_Tyr; Protein tyrosine kinase
      cl02447
      Location:315457
      CRD_FZ; CRD_domain cysteine-rich domain, also known as Fz (frizzled) domain
      cl11960
      Location:135201
      Ig; Immunoglobulin domain
    5. XM_011518708.3XP_011517010.1  muscle, skeletal receptor tyrosine-protein kinase isoform X5

      Conserved Domains (3) summary
      cd05050
      Location:157446
      PTKc_Musk; Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase
      pfam07714
      Location:163444
      Pkinase_Tyr; Protein tyrosine kinase
      cl02447
      Location:145
      CRD_FZ; CRD_domain cysteine-rich domain, also known as Fz (frizzled) domain

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060933.1 Alternate T2T-CHM13v2.0

      Range
      122838447..122978207
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_054362993.1XP_054218968.1  muscle, skeletal receptor tyrosine-protein kinase isoform X1

    2. XM_054362994.1XP_054218969.1  muscle, skeletal receptor tyrosine-protein kinase isoform X2

    3. XM_054362996.1XP_054218971.1  muscle, skeletal receptor tyrosine-protein kinase isoform X4

    4. XM_054362995.1XP_054218970.1  muscle, skeletal receptor tyrosine-protein kinase isoform X3

      UniProtKB/TrEMBL
      A0A087WSY1
    5. XM_054362997.1XP_054218972.1  muscle, skeletal receptor tyrosine-protein kinase isoform X5