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    ZNF32-AS3 ZNF32 antisense RNA 3 [ Homo sapiens (human) ]

    Gene ID: 414201, updated on 10-Dec-2024

    Summary

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    Official Symbol
    ZNF32-AS3provided by HGNC
    Official Full Name
    ZNF32 antisense RNA 3provided by HGNC
    Primary source
    HGNC:HGNC:23583
    See related
    Ensembl:ENSG00000228426 AllianceGenome:HGNC:23583
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    C10orf44; ZNF32-OT1; bA402L1.3
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See ZNF32-AS3 in Genome Data Viewer
    Location:
    10q11.21
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (43628817..43674699)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (44509739..44555594)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (44124265..44170147)

    Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3304 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2335 Neighboring gene CAP1 pseudogene 2 Neighboring gene zinc finger protein 485 Neighboring gene uncharacterized LOC124902416 Neighboring gene ribosomal protein L21 pseudogene 88 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr10:44141084-44142283 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2336 Neighboring gene ZNF32 antisense RNA 1 Neighboring gene ZNF32 antisense RNA 2 Neighboring gene zinc finger protein 32 Neighboring gene ReSE screen-validated silencer GRCh37_chr10:44162766-44162945 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_12364 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2337 Neighboring gene uncharacterized LOC124902417 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_12372 Neighboring gene SPRING1 pseudogene 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    Bibliography

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    Related articles in PubMed

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    Other Names

    • ZNF32 antisense RNA 3 (non-protein coding)
    • ZNF32 overlapping transcript 1 (non-protein coding)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_038867.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL645634
      Related
      ENST00000458063.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

      Range
      43628817..43674699
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060934.1 Alternate T2T-CHM13v2.0

      Range
      44509739..44555594
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Other Literature Sources
    Molecular Biology Databases
    Research Materials