NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001326682.2 → NP_001313611.1 histone demethylase UTY isoform 2
Status: VALIDATED
- Source sequence(s)
-
AC145571, AC148319
- Consensus CDS
-
CCDS85834.1
- UniProtKB/Swiss-Prot
- O97979, P79457
- UniProtKB/TrEMBL
-
E9PWW8
- Related
- ENSMUSP00000114752.2, ENSMUST00000139365.8
- Conserved Domains (7) summary
-
- pfam02373
Location:944 → 1052
- JmjC; JmjC domain, hydroxylase
- smart00558
Location:910 → 974
- JmjC; A domain family that is part of the cupin metalloenzyme superfamily
- sd00006
Location:279 → 306
- TPR; TPR repeat [structural motif]
- pfam00515
Location:124 → 157
- TPR_1; Tetratricopeptide repeat
- pfam13414
Location:311 → 372
- TPR_11; TPR repeat
- pfam13424
Location:274 → 342
- TPR_12; Tetratricopeptide repeat
- pfam13431
Location:266 → 297
- TPR_17; Tetratricopeptide repeat
-
NM_001326683.2 → NP_001313612.1 histone demethylase UTY isoform 3
Status: VALIDATED
- Source sequence(s)
-
AC145571, AC148319
- Consensus CDS
-
CCDS85833.1
- UniProtKB/Swiss-Prot
- O97979, P79457
- UniProtKB/TrEMBL
-
Q3UQE8
- Related
- ENSMUSP00000114910.2, ENSMUST00000154004.8
- Conserved Domains (7) summary
-
- pfam02373
Location:882 → 990
- JmjC; JmjC domain, hydroxylase
- smart00558
Location:848 → 912
- JmjC; A domain family that is part of the cupin metalloenzyme superfamily
- sd00006
Location:217 → 244
- TPR; TPR repeat [structural motif]
- pfam00515
Location:62 → 95
- TPR_1; Tetratricopeptide repeat
- pfam13414
Location:249 → 310
- TPR_11; TPR repeat
- pfam13424
Location:212 → 280
- TPR_12; Tetratricopeptide repeat
- pfam13431
Location:204 → 235
- TPR_17; Tetratricopeptide repeat
-
NM_001419826.1 → NP_001406755.1 histone demethylase UTY isoform 4
Status: VALIDATED
- Source sequence(s)
-
AC145571, AC148319
- UniProtKB/Swiss-Prot
- O97979, P79457
-
NM_001419827.1 → NP_001406756.1 histone demethylase UTY isoform 5
Status: VALIDATED
- Source sequence(s)
-
AC145571, AC148319
- UniProtKB/Swiss-Prot
- O97979, P79457
-
NM_001419828.1 → NP_001406757.1 histone demethylase UTY isoform 6
Status: VALIDATED
- Source sequence(s)
-
AC145571, AC148319
- UniProtKB/Swiss-Prot
- O97979, P79457
-
NM_001419829.1 → NP_001406758.1 histone demethylase UTY isoform 7
Status: VALIDATED
- Source sequence(s)
-
AC145571, AC148319
- UniProtKB/Swiss-Prot
- O97979, P79457
-
NM_001419830.1 → NP_001406759.1 histone demethylase UTY isoform 8
Status: VALIDATED
- Source sequence(s)
-
AC145571, AC148319
- UniProtKB/Swiss-Prot
- O97979, P79457
-
NM_009484.4 → NP_033510.2 histone demethylase UTY isoform 1
See identical proteins and their annotated locations for NP_033510.2
Status: VALIDATED
- Source sequence(s)
-
AC145571, AC148319
- Consensus CDS
-
CCDS41216.1
- UniProtKB/Swiss-Prot
- O97979, P79457
- UniProtKB/TrEMBL
-
G3X9F2
- Related
- ENSMUSP00000070012.8, ENSMUST00000069309.14
- Conserved Domains (7) summary
-
- pfam02373
Location:945 → 1053
- JmjC; JmjC domain, hydroxylase
- smart00558
Location:911 → 975
- JmjC; A domain family that is part of the cupin metalloenzyme superfamily
- sd00006
Location:280 → 307
- TPR; TPR repeat [structural motif]
- pfam00515
Location:125 → 158
- TPR_1; Tetratricopeptide repeat
- pfam13414
Location:312 → 373
- TPR_11; TPR repeat
- pfam13424
Location:275 → 343
- TPR_12; Tetratricopeptide repeat
- pfam13431
Location:267 → 298
- TPR_17; Tetratricopeptide repeat
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000087.8 Reference GRCm39 C57BL/6J
- Range
-
1085187..1245787 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011248585.4 → XP_011246887.1 histone demethylase UTY isoform X9
- UniProtKB/Swiss-Prot
- O97979, P79457
- Conserved Domains (4) summary
-
- smart00558
Location:935 → 999
- JmjC; A domain family that is part of the cupin metalloenzyme superfamily
- COG0457
Location:130 → 397
- TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
- sd00006
Location:304 → 331
- TPR; TPR repeat [structural motif]
- pfam02373
Location:969 → 1077
- JmjC; JmjC domain, hydroxylase
-
XM_011248583.2 → XP_011246885.1 histone demethylase UTY isoform X5
- UniProtKB/Swiss-Prot
- O97979, P79457
- Conserved Domains (4) summary
-
- smart00558
Location:916 → 980
- JmjC; A domain family that is part of the cupin metalloenzyme superfamily
- COG0457
Location:111 → 378
- TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
- sd00006
Location:285 → 312
- TPR; TPR repeat [structural motif]
- pfam02373
Location:950 → 1058
- JmjC; JmjC domain, hydroxylase
-
XM_036162190.1 → XP_036018083.1 histone demethylase UTY isoform X13
- UniProtKB/TrEMBL
-
E9Q504
- Related
- ENSMUSP00000115113.2, ENSMUST00000143286.8
- Conserved Domains (4) summary
-
- smart00558
Location:862 → 926
- JmjC; A domain family that is part of the cupin metalloenzyme superfamily
- COG0457
Location:97 → 369
- TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
- sd00006
Location:276 → 303
- TPR; TPR repeat [structural motif]
- pfam02373
Location:896 → 1004
- JmjC; JmjC domain, hydroxylase
-
XM_011248582.4 → XP_011246884.1 histone demethylase UTY isoform X4
- UniProtKB/Swiss-Prot
- O97979, P79457
- Conserved Domains (4) summary
-
- smart00558
Location:931 → 995
- JmjC; A domain family that is part of the cupin metalloenzyme superfamily
- COG0457
Location:126 → 393
- TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
- sd00006
Location:300 → 327
- TPR; TPR repeat [structural motif]
- pfam02373
Location:965 → 1073
- JmjC; JmjC domain, hydroxylase
-
XM_030251565.2 → XP_030107425.1 histone demethylase UTY isoform X15
- UniProtKB/Swiss-Prot
- O97979, P79457
- Conserved Domains (4) summary
-
- smart00558
Location:848 → 912
- JmjC; A domain family that is part of the cupin metalloenzyme superfamily
- COG0457
Location:38 → 310
- TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
- sd00006
Location:217 → 244
- TPR; TPR repeat [structural motif]
- pfam02373
Location:882 → 990
- JmjC; JmjC domain, hydroxylase
-
XM_011248581.4 → XP_011246883.1 histone demethylase UTY isoform X3
- UniProtKB/Swiss-Prot
- O97979, P79457
- Conserved Domains (4) summary
-
- smart00558
Location:932 → 996
- JmjC; A domain family that is part of the cupin metalloenzyme superfamily
- COG0457
Location:127 → 394
- TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
- sd00006
Location:301 → 328
- TPR; TPR repeat [structural motif]
- pfam02373
Location:966 → 1074
- JmjC; JmjC domain, hydroxylase
-
XM_017318687.3 → XP_017174176.1 histone demethylase UTY isoform X2
- UniProtKB/Swiss-Prot
- O97979, P79457
- Conserved Domains (4) summary
-
- smart00558
Location:934 → 998
- JmjC; A domain family that is part of the cupin metalloenzyme superfamily
- COG0457
Location:129 → 396
- TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
- sd00006
Location:303 → 330
- TPR; TPR repeat [structural motif]
- pfam02373
Location:968 → 1076
- JmjC; JmjC domain, hydroxylase
-
XM_017318688.3 → XP_017174177.1 histone demethylase UTY isoform X14
- UniProtKB/Swiss-Prot
- O97979, P79457
- Conserved Domains (4) summary
-
- smart00558
Location:851 → 915
- JmjC; A domain family that is part of the cupin metalloenzyme superfamily
- COG0457
Location:41 → 313
- TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
- sd00006
Location:220 → 247
- TPR; TPR repeat [structural motif]
- pfam02373
Location:885 → 993
- JmjC; JmjC domain, hydroxylase
-
XM_006531587.5 → XP_006531650.1 histone demethylase UTY isoform X18
- UniProtKB/Swiss-Prot
- O97979, P79457
- Conserved Domains (4) summary
-
- smart00558
Location:886 → 950
- JmjC; A domain family that is part of the cupin metalloenzyme superfamily
- COG0457
Location:101 → 373
- TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
- sd00006
Location:280 → 307
- TPR; TPR repeat [structural motif]
- pfam02373
Location:920 → 1028
- JmjC; JmjC domain, hydroxylase
-
XM_011248586.4 → XP_011246888.1 histone demethylase UTY isoform X10
- UniProtKB/Swiss-Prot
- O97979, P79457
- Conserved Domains (4) summary
-
- smart00558
Location:890 → 954
- JmjC; A domain family that is part of the cupin metalloenzyme superfamily
- COG0457
Location:130 → 397
- TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
- sd00006
Location:304 → 331
- TPR; TPR repeat [structural motif]
- pfam02373
Location:924 → 1032
- JmjC; JmjC domain, hydroxylase
-
XM_011248584.4 → XP_011246886.1 histone demethylase UTY isoform X6
- UniProtKB/Swiss-Prot
- O97979, P79457
- Conserved Domains (4) summary
-
- smart00558
Location:910 → 974
- JmjC; A domain family that is part of the cupin metalloenzyme superfamily
- COG0457
Location:130 → 397
- TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
- sd00006
Location:304 → 331
- TPR; TPR repeat [structural motif]
- pfam02373
Location:944 → 1052
- JmjC; JmjC domain, hydroxylase
-
XM_017318686.3 → XP_017174175.1 histone demethylase UTY isoform X1
- UniProtKB/Swiss-Prot
- O97979, P79457
- Conserved Domains (4) summary
-
- smart00558
Location:935 → 999
- JmjC; A domain family that is part of the cupin metalloenzyme superfamily
- COG0457
Location:130 → 397
- TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
- sd00006
Location:304 → 331
- TPR; TPR repeat [structural motif]
- pfam02373
Location:969 → 1077
- JmjC; JmjC domain, hydroxylase
-
XM_036162191.1 → XP_036018084.1 histone demethylase UTY isoform X17
- UniProtKB/TrEMBL
-
Q3TNX2
- Conserved Domains (2) summary
-
- smart00558
Location:448 → 512
- JmjC; A domain family that is part of the cupin metalloenzyme superfamily
- pfam02373
Location:482 → 590
- JmjC; JmjC domain, hydroxylase
-
XM_017318689.2 → XP_017174178.1 histone demethylase UTY isoform X17
- UniProtKB/TrEMBL
-
Q3TNX2
- Conserved Domains (2) summary
-
- smart00558
Location:448 → 512
- JmjC; A domain family that is part of the cupin metalloenzyme superfamily
- pfam02373
Location:482 → 590
- JmjC; JmjC domain, hydroxylase
-
XM_011248589.4 → XP_011246891.1 histone demethylase UTY isoform X16
- Conserved Domains (2) summary
-
- COG0457
Location:130 → 397
- TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
- sd00006
Location:304 → 331
- TPR; TPR repeat [structural motif]
RNA
-
XR_004940595.1 RNA Sequence
-
XR_879400.4 RNA Sequence
-
XR_004940593.1 RNA Sequence
-
XR_004940592.1 RNA Sequence
-
XR_001782882.3 RNA Sequence
- Related
-
ENSMUST00000154666.8
-
XR_004940594.1 RNA Sequence