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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_033893.2 RefSeqGene
- Range
-
5080..88092
- Download
- GenBank, FASTA, Sequence Viewer (Graphics), LRG_1221
mRNA and Protein(s)
-
NM_006785.4 → NP_006776.1 mucosa-associated lymphoid tissue lymphoma translocation protein 1 isoform a
See identical proteins and their annotated locations for NP_006776.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longer isoform (a).
- Source sequence(s)
-
AC104365, AF316597, AK026459
- Consensus CDS
-
CCDS11967.1
- UniProtKB/Swiss-Prot
- Q9NTB7, Q9UDY8, Q9ULX4
- UniProtKB/TrEMBL
-
A8K5S1
- Related
- ENSP00000497997.1, ENST00000649217.2
- Conserved Domains (5) summary
-
- smart00410
Location:133 → 201
- IG_like; Immunoglobulin like
- pfam07679
Location:233 → 308
- I-set; Immunoglobulin I-set domain
- cd08783
Location:42 → 126
- Death_MALT1; Death domain similar to that found in Mucosa-associated lymphoid tissue-lymphoma-translocation gene 1
- pfam00656
Location:343 → 560
- Peptidase_C14; Caspase domain
- pfam13895
Location:232 → 308
- Ig_2; Immunoglobulin domain
-
NM_173844.3 → NP_776216.1 mucosa-associated lymphoid tissue lymphoma translocation protein 1 isoform b
See identical proteins and their annotated locations for NP_776216.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an in-frame exon in the coding region, compared to variant 1. The encoded isoform (b) lacks an internal segment, compared to isoform a.
- Source sequence(s)
-
AC104365, AK291386, AL137399, BC030143
- Consensus CDS
-
CCDS11968.1
- UniProtKB/TrEMBL
-
A8K5S1
- Related
- ENSP00000304161.3, ENST00000345724.7
- Conserved Domains (5) summary
-
- smart00410
Location:133 → 201
- IG_like; Immunoglobulin like
- pfam07679
Location:233 → 308
- I-set; Immunoglobulin I-set domain
- cd08783
Location:42 → 126
- Death_MALT1; Death domain similar to that found in Mucosa-associated lymphoid tissue-lymphoma-translocation gene 1
- pfam00656
Location:332 → 549
- Peptidase_C14; Caspase domain
- pfam13895
Location:232 → 308
- Ig_2; Immunoglobulin domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000018.10 Reference GRCh38.p14 Primary Assembly
- Range
-
58671465..58754477
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011525794.2 → XP_011524096.1 mucosa-associated lymphoid tissue lymphoma translocation protein 1 isoform X1
- UniProtKB/TrEMBL
-
A0A3B3IS32
- Related
- ENSP00000497036.1, ENST00000650045.1
- Conserved Domains (5) summary
-
- smart00410
Location:133 → 201
- IG_like; Immunoglobulin like
- pfam07679
Location:233 → 308
- I-set; Immunoglobulin I-set domain
- cd08783
Location:42 → 126
- Death_MALT1; Death domain similar to that found in Mucosa-associated lymphoid tissue-lymphoma-translocation gene 1
- pfam00656
Location:343 → 412
- Peptidase_C14; Caspase domain
- pfam13895
Location:232 → 308
- Ig_2; Immunoglobulin domain
RNA
-
XR_007066087.1 RNA Sequence
Alternate T2T-CHM13v2.0
Genomic
-
NC_060942.1 Alternate T2T-CHM13v2.0
- Range
-
58872604..58955588
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054318158.1 → XP_054174133.1 mucosa-associated lymphoid tissue lymphoma translocation protein 1 isoform X1
- UniProtKB/TrEMBL
-
A0A3B3IS32
RNA
-
XR_008484983.1 RNA Sequence