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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001287499.2 → NP_001274428.1 IQ domain-containing protein E isoform 3
See identical proteins and their annotated locations for NP_001274428.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) contains an alternate 3' terminal exon and it thus differs in the 3' coding region and 3' UTR, compared to variant 1. The encoded isoform (3) has a distinct C-terminus and is longer than isoform 1.
- Source sequence(s)
-
AK092404, AK302053, HY029256
- Consensus CDS
-
CCDS75559.1
- UniProtKB/TrEMBL
- A0A087WX45, B3KRY4
- Related
- ENSP00000480715.1, ENST00000476665.5
- Conserved Domains (1) summary
-
- TIGR04523
Location:141 → 472
- Mplasa_alph_rch; helix-rich Mycoplasma protein
-
NM_001287500.2 → NP_001274429.1 IQ domain-containing protein E isoform 4
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) lacks an alternate in-frame exon in the 5' coding region, and contains an alternate 3' terminal exon and it thus differs in the 3' coding region and 3' UTR, compared to variant 1. The encoded isoform (4) has a distinct C-terminus and is shorter than isoform 1.
- Source sequence(s)
-
AK092404, AK293372, AK302053, HY029256
- Consensus CDS
-
CCDS47527.2
- UniProtKB/TrEMBL
- A0A087WX19, B4DDX4
- Related
- ENSP00000480668.1, ENST00000611775.4
- Conserved Domains (1) summary
-
- TIGR04523
Location:125 → 456
- Mplasa_alph_rch; helix-rich Mycoplasma protein
-
NM_001287501.2 → NP_001274430.1 IQ domain-containing protein E isoform 5
See identical proteins and their annotated locations for NP_001274430.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) lacks two alternate exons in the 5' coding region and initiates translation at a downstream in-frame start codon, compared to variant 1. The encoded isoform (5) is shorter at the N-terminus, compared to isoform 1.
- Source sequence(s)
-
AL136792, AL137525, BC043150, HY029256
- Consensus CDS
-
CCDS75560.1
- UniProtKB/TrEMBL
-
X5DR21
- Related
- ENSP00000485601.1, ENST00000623361.3
- Conserved Domains (1) summary
-
- COG1196
Location:81 → 367
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
-
NM_001287502.2 → NP_001274431.1 IQ domain-containing protein E isoform 6
See identical proteins and their annotated locations for NP_001274431.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (6) lacks two alternate exons in the 5' coding region, initiates translation at a downstream in-frame start codon, and contains an alternate 3' terminal exon and it thus differs in the 3' coding region and 3' UTR, compared to variant 1. The encoded isoform (6) is shorter at the N-terminus and has a distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
AK302053, HY029256
- UniProtKB/TrEMBL
- B4DDX4, B4DXN1
- Conserved Domains (1) summary
-
- COG1196
Location:81 → 367
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
-
NM_001410865.1 → NP_001397794.1 IQ domain-containing protein E isoform 7
Status: VALIDATED
- Source sequence(s)
-
AC073462, AC092488
- Consensus CDS
-
CCDS94047.1
- UniProtKB/TrEMBL
-
X5DR21
- Related
- ENSP00000396178.2, ENST00000438376.6
-
NM_152558.5 → NP_689771.3 IQ domain-containing protein E isoform 1
See identical proteins and their annotated locations for NP_689771.3
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes isoform 1.
- Source sequence(s)
-
AL136792, AL137525, BC071858, HY029256
- Consensus CDS
-
CCDS43542.1
- UniProtKB/Swiss-Prot
- Q4G0P7, Q6IPM2, Q6P7T4, Q9H0H7, Q9UPX7
- UniProtKB/TrEMBL
-
X5DR21
- Related
- ENSP00000385597.2, ENST00000402050.7
- Conserved Domains (1) summary
-
- TIGR04523
Location:141 → 472
- Mplasa_alph_rch; helix-rich Mycoplasma protein
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000007.14 Reference GRCh38.p14 Primary Assembly
- Range
-
2558979..2614728
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017011902.2 → XP_016867391.1 IQ domain-containing protein E isoform X2
- UniProtKB/TrEMBL
-
X5DR21
-
XM_047420081.1 → XP_047276037.1 IQ domain-containing protein E isoform X1
- UniProtKB/TrEMBL
-
B3KRY4
-
XM_011515242.2 → XP_011513544.1 IQ domain-containing protein E isoform X3
- UniProtKB/TrEMBL
-
B3KRY4
- Conserved Domains (1) summary
-
- COG1196
Location:101 → 387
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
-
XM_047420083.1 → XP_047276039.1 IQ domain-containing protein E isoform X4
- UniProtKB/TrEMBL
-
B4DDX4
-
XM_024446699.2 → XP_024302467.1 IQ domain-containing protein E isoform X7
- UniProtKB/TrEMBL
-
B4DDX4
- Conserved Domains (1) summary
-
- cl25732
Location:70 → 339
- SMC_N; RecF/RecN/SMC N terminal domain
-
XM_017011903.2 → XP_016867392.1 IQ domain-containing protein E isoform X6
- UniProtKB/TrEMBL
-
X5DR21
- Related
- ENSP00000313772.7, ENST00000325979.11
- Conserved Domains (1) summary
-
- COG1196
Location:81 → 367
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
-
XM_047420084.1 → XP_047276040.1 IQ domain-containing protein E isoform X5
- UniProtKB/TrEMBL
- B4DDX4, B4DXN1
-
XM_006715676.3 → XP_006715739.1 IQ domain-containing protein E isoform X5
See identical proteins and their annotated locations for XP_006715739.1
- UniProtKB/TrEMBL
- B4DDX4, B4DXN1
- Conserved Domains (1) summary
-
- COG1196
Location:81 → 367
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
-
XM_011515244.4 → XP_011513546.1 IQ domain-containing protein E isoform X8
- Conserved Domains (1) summary
-
- COG1196
Location:4 → 252
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
Alternate T2T-CHM13v2.0
Genomic
-
NC_060931.1 Alternate T2T-CHM13v2.0
- Range
-
2672578..2728247
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054357693.1 → XP_054213668.1 IQ domain-containing protein E isoform X2
- UniProtKB/TrEMBL
-
X5DR21
-
XM_054357692.1 → XP_054213667.1 IQ domain-containing protein E isoform X1
- UniProtKB/TrEMBL
-
B3KRY4
-
XM_054357694.1 → XP_054213669.1 IQ domain-containing protein E isoform X3
- UniProtKB/TrEMBL
-
B3KRY4
-
XM_054357695.1 → XP_054213670.1 IQ domain-containing protein E isoform X4
- UniProtKB/TrEMBL
-
B4DDX4
-
XM_054357698.1 → XP_054213673.1 IQ domain-containing protein E isoform X7
- UniProtKB/TrEMBL
-
B4DDX4
-
XM_054357697.1 → XP_054213672.1 IQ domain-containing protein E isoform X6
- UniProtKB/TrEMBL
-
X5DR21
-
XM_054357696.1 → XP_054213671.1 IQ domain-containing protein E isoform X5
- UniProtKB/TrEMBL
-
B4DDX4
-
XM_054357699.1 → XP_054213674.1 IQ domain-containing protein E isoform X8
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_001100390.1: Suppressed sequence
- Description
- NM_001100390.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.