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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_027724.2 RefSeqGene
- Range
-
5002..358324
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001195296.2 → NP_001182225.1 mirror-image polydactyly gene 1 protein isoform 1
See identical proteins and their annotated locations for NP_001182225.1
Status: REVIEWED
- Source sequence(s)
-
AK291850, AL121790, BX537396, CB105473
- Consensus CDS
-
CCDS9664.1
- UniProtKB/Swiss-Prot
- D3DSA4, Q7Z3J0, Q8IV14, Q8TD10
- UniProtKB/TrEMBL
-
A8K735
- Related
- ENSP00000444254.2, ENST00000537471.7
- Conserved Domains (2) summary
-
- COG1196
Location:105 → 340
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- COG4372
Location:259 → 431
- COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]
-
NM_001195297.2 → NP_001182226.1 mirror-image polydactyly gene 1 protein isoform 1
See identical proteins and their annotated locations for NP_001182226.1
Status: REVIEWED
- Source sequence(s)
-
AL121790, AY059470, BC036523, BX537396, CB105473
- Consensus CDS
-
CCDS9664.1
- UniProtKB/Swiss-Prot
- D3DSA4, Q7Z3J0, Q8IV14, Q8TD10
- UniProtKB/TrEMBL
-
A8K735
- Related
- ENSP00000379589.2, ENST00000396294.7
- Conserved Domains (2) summary
-
- COG1196
Location:105 → 340
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- COG4372
Location:259 → 431
- COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]
-
NM_001388067.1 → NP_001374996.1 mirror-image polydactyly gene 1 protein isoform 1
Status: REVIEWED
- Source sequence(s)
-
AL079304, AL109759, AL121790, AL121857
- Consensus CDS
-
CCDS9664.1
- UniProtKB/Swiss-Prot
- D3DSA4, Q7Z3J0, Q8IV14, Q8TD10
- UniProtKB/TrEMBL
-
A8K735
- Related
- ENSP00000506738.1, ENST00000684589.1
- Conserved Domains (2) summary
-
- COG1196
Location:105 → 340
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- COG4372
Location:259 → 431
- COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]
-
NM_001388068.1 → NP_001374997.1 mirror-image polydactyly gene 1 protein isoform 1
Status: REVIEWED
- Source sequence(s)
-
AL079304, AL109759, AL121790, AL121857
- Consensus CDS
-
CCDS9664.1
- UniProtKB/Swiss-Prot
- D3DSA4, Q7Z3J0, Q8IV14, Q8TD10
- UniProtKB/TrEMBL
-
A8K735
- Conserved Domains (2) summary
-
- COG1196
Location:105 → 340
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- COG4372
Location:259 → 431
- COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]
-
NM_001388069.1 → NP_001374998.1 mirror-image polydactyly gene 1 protein isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) uses the same exon combination as variant 14 but represents the allele encoded by the GRCh38 reference genome. It encodes isoform 2.
- Source sequence(s)
-
AL079304, AL109759, AL121790, AL121857
- Consensus CDS
-
CCDS91866.1
- UniProtKB/TrEMBL
- A0A8Q3SHU0, A0A8Q3SHY7
- Related
- ENSP00000511967.1, ENST00000694964.1
- Conserved Domains (1) summary
-
- COG1196
Location:132 → 432
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
-
NM_001388070.1 → NP_001374999.1 mirror-image polydactyly gene 1 protein isoform 3
Status: REVIEWED
- Source sequence(s)
-
AL079304, AL109759, AL121790, AL121857
- Consensus CDS
-
CCDS91869.1
- UniProtKB/TrEMBL
- G5EA54, Q4G0U7
- Related
- ENSP00000438319.2, ENST00000539062.6
- Conserved Domains (2) summary
-
- COG1196
Location:74 → 309
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- COG4372
Location:228 → 400
- COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]
-
NM_001388071.1 → NP_001375000.1 mirror-image polydactyly gene 1 protein isoform 3
Status: REVIEWED
- Source sequence(s)
-
AL079304, AL109759, AL121790, AL121857
- Consensus CDS
-
CCDS91869.1
- UniProtKB/TrEMBL
- G5EA54, Q4G0U7
- Conserved Domains (2) summary
-
- COG1196
Location:74 → 309
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- COG4372
Location:228 → 400
- COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]
-
NM_001388072.1 → NP_001375001.1 mirror-image polydactyly gene 1 protein isoform 3
Status: REVIEWED
- Source sequence(s)
-
AL079304, AL109759, AL121790, AL121857
- Consensus CDS
-
CCDS91869.1
- UniProtKB/TrEMBL
- G5EA54, Q4G0U7
- Conserved Domains (2) summary
-
- COG1196
Location:74 → 309
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- COG4372
Location:228 → 400
- COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]
-
NM_001388073.1 → NP_001375002.1 mirror-image polydactyly gene 1 protein isoform 4
Status: REVIEWED
- Source sequence(s)
-
AL079304, AL109759, AL121790, AL121857
- UniProtKB/TrEMBL
-
A8K735
- Conserved Domains (1) summary
-
- COG1196
Location:102 → 387
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
-
NM_001388074.1 → NP_001375003.1 mirror-image polydactyly gene 1 protein isoform 5
Status: REVIEWED
- Source sequence(s)
-
AL079304, AL109759, AL121790, AL121857
- UniProtKB/TrEMBL
-
Q4G0U7
- Conserved Domains (1) summary
-
- COG1196
Location:71 → 356
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
-
NM_001388075.1 → NP_001375004.1 mirror-image polydactyly gene 1 protein isoform 5
Status: REVIEWED
- Source sequence(s)
-
AL079304, AL109759, AL121790, AL121857
- UniProtKB/TrEMBL
-
Q4G0U7
- Conserved Domains (1) summary
-
- COG1196
Location:71 → 356
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
-
NM_001388077.1 → NP_001375006.1 mirror-image polydactyly gene 1 protein isoform 6
Status: REVIEWED
- Source sequence(s)
-
AL079304, AL109759, AL121790, AL121857
- UniProtKB/TrEMBL
-
A8K735
- Conserved Domains (1) summary
-
- COG1196
Location:105 → 340
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
-
NM_001412440.1 → NP_001399369.1 mirror-image polydactyly gene 1 protein isoform 7
Status: REVIEWED
- Description
- Transcript Variant: This variant (14) uses the same exon combination as variant 6 but represents the allele encoded by the T2T-CHM13v2.0 genome assembly. The encoded isoform (7) has a longer frameshifted N-terminus compared to isoform 2.
- Source sequence(s)
-
CP068264
- UniProtKB/TrEMBL
-
A0A8Q3SHU0
-
NM_138731.7 → NP_620059.1 mirror-image polydactyly gene 1 protein isoform 1
See identical proteins and their annotated locations for NP_620059.1
Status: REVIEWED
- Source sequence(s)
-
AL121790, BC036523, BX537396, CB105473
- Consensus CDS
-
CCDS9664.1
- UniProtKB/Swiss-Prot
- D3DSA4, Q7Z3J0, Q8IV14, Q8TD10
- UniProtKB/TrEMBL
-
A8K735
- Related
- ENSP00000333539.7, ENST00000327441.11
- Conserved Domains (2) summary
-
- COG1196
Location:105 → 340
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- COG4372
Location:259 → 431
- COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000014.9 Reference GRCh38.p14 Primary Assembly
- Range
-
37197937..37552361
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060938.1 Alternate T2T-CHM13v2.0
- Range
-
31387366..31741420
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)