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    Tmem121 transmembrane protein 121 [ Mus musculus (house mouse) ]

    Gene ID: 69195, updated on 27-Nov-2024

    Summary

    Official Symbol
    Tmem121provided by MGI
    Official Full Name
    transmembrane protein 121provided by MGI
    Primary source
    MGI:MGI:1916445
    See related
    Ensembl:ENSMUSG00000049036 AllianceGenome:MGI:1916445
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Hole; 2410008J05Rik
    Summary
    Predicted to be located in membrane. Is expressed in branchial arch; eye; limb; and neural ectoderm. Orthologous to human TMEM121 (transmembrane protein 121). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in CNS E18 (RPKM 23.5), whole brain E14.5 (RPKM 21.2) and 10 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Tmem121 in Genome Data Viewer
    Location:
    12 F1; 12 61.76 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (113149523..113153143)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (113185903..113189523)

    Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene CapStarr-seq enhancer MGSCv37_chr12:114406329-114406556 Neighboring gene origin of replication downstream of immunoglobulin heavy chain (Igh) locus Neighboring gene CapStarr-seq enhancer MGSCv37_chr12:114425816-114425969 Neighboring gene STARR-seq mESC enhancer starr_33382 Neighboring gene STARR-positive B cell enhancer ABC_E7190 Neighboring gene STARR-positive B cell enhancer ABC_E7191 Neighboring gene STARR-positive B cell enhancer mm9_chr12:114458733-114459034 Neighboring gene STARR-positive B cell enhancer mm9_chr12:114460326-114460627 Neighboring gene STARR-positive B cell enhancer ABC_E5364 Neighboring gene STARR-positive B cell enhancer mm9_chr12:114482971-114483272 Neighboring gene predicted gene, 25622 Neighboring gene cysteine-rich protein 1 Neighboring gene tubulin epsilon and delta complex 1 Neighboring gene immunoglobulin heavy constant alpha Neighboring gene immunoglobulin heavy chain complex

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (3) 

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    transmembrane protein 121
    Names
    protein hole

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_153776.2NP_722471.2  transmembrane protein 121

      See identical proteins and their annotated locations for NP_722471.2

      Status: VALIDATED

      Source sequence(s)
      BC043474, BY325504
      Consensus CDS
      CCDS26206.1
      UniProtKB/Swiss-Prot
      Q80XA0, Q8R3W8, Q8R4A5
      Related
      ENSMUSP00000055994.7, ENSMUST00000058491.8
      Conserved Domains (1) summary
      pfam14997
      Location:73267
      CECR6_TMEM121; CECR6/TMEM121 family

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000078.7 Reference GRCm39 C57BL/6J

      Range
      113149523..113153143
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006516201.5XP_006516264.1  transmembrane protein 121 isoform X1

      See identical proteins and their annotated locations for XP_006516264.1

      UniProtKB/Swiss-Prot
      Q80XA0, Q8R3W8, Q8R4A5
      Conserved Domains (1) summary
      pfam14997
      Location:73267
      CECR6_TMEM121; CECR6/TMEM121 family