U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Tcstv7a Tcstv family member 7A [ Mus musculus (house mouse) ]

    Gene ID: 380878, updated on 27-Nov-2024

    Summary

    Official Symbol
    Tcstv7aprovided by MGI
    Official Full Name
    Tcstv family member 7Aprovided by MGI
    Primary source
    MGI:MGI:2687009
    See related
    Ensembl:ENSMUSG00000094237 AllianceGenome:MGI:2687009
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Low expression observed in reference dataset See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Tcstv7a in Genome Data Viewer
    Location:
    13 D2.3; 13
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (120289497..120291753, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (119827961..119830217, complement)

    Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 41077 Neighboring gene zinc finger protein 131 Neighboring gene predicted gene, 23308 Neighboring gene Tcstv family member 6A Neighboring gene predicted gene, 21358

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein LOC380878
    Names
    uniform group of 2-cell-stage gene family

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001001449.3NP_001001449.1  uncharacterized protein LOC380878

      See identical proteins and their annotated locations for NP_001001449.1

      Status: PREDICTED

      Source sequence(s)
      AC231112
      Consensus CDS
      CCDS56904.1
      UniProtKB/TrEMBL
      A0A286YDE9, O70618
      Related
      ENSMUSP00000141964.2, ENSMUST00000195234.2
      Conserved Domains (1) summary
      pfam07270
      Location:1150
      DUF1438; Protein of unknown function (DUF1438)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000079.7 Reference GRCm39 C57BL/6J

      Range
      120289497..120291753 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)