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    Aadacl4fm1 AADACL4 family member 1 [ Mus musculus (house mouse) ]

    Gene ID: 381572, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Aadacl4fm1provided by MGI
    Official Full Name
    AADACL4 family member 1provided by MGI
    Primary source
    MGI:MGI:2685880
    See related
    Ensembl:ENSMUSG00000028593 AllianceGenome:MGI:2685880
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm1034; Aadacl4; 9430007A20Rik
    Summary
    Predicted to enable hydrolase activity. Predicted to be located in membrane. Is expressed in brain and spinal cord mantle layer. Orthologous to human AADACL4 (arylacetamide deacetylase like 4). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See Aadacl4fm1 in Genome Data Viewer
    Location:
    4 E1; 4 77.98 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (144246392..144255923)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (144519822..144529353)

    Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_11987 Neighboring gene arylacetamide deacetylase like 3 Neighboring gene chromobox homolog 3 pseudogene Neighboring gene high mobility group box 2 pseudogene Neighboring gene integrator complex subunit 5 pseudogene Neighboring gene AADACL4 family member 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
    2. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    3. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    4. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
    5. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Variation

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    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    arylacetamide deacetylase-like 4 family member 1
    Names
    arylacetamide deacetylase-like 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_198662.3 → NP_941064.2  arylacetamide deacetylase-like 4 family member 1

      See identical proteins and their annotated locations for NP_941064.2

      Status: VALIDATED

      Source sequence(s)
      AK034567, AL606902
      Consensus CDS
      CCDS51366.1
      UniProtKB/Swiss-Prot
      A2A751, Q8BM81
      Related
      ENSMUSP00000030328.3, ENSMUST00000030328.3
      Conserved Domains (2) summary
      COG0657
      Location:97 → 382
      Aes; Acetyl esterase/lipase [Lipid transport and metabolism]
      pfam07859
      Location:115 → 381
      Abhydrolase_3; alpha/beta hydrolase fold

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000070.7 Reference GRCm39 C57BL/6J

      Range
      144246392..144255923
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8BM81.2 GenPept UniProtKB/Swiss-Prot:Q8BM81

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