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    LOC101930421 uncharacterized LOC101930421 [ Homo sapiens (human) ]

    Gene ID: 101930421, updated on 22-Oct-2024

    Summary

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    Gene symbol
    LOC101930421
    Gene description
    uncharacterized LOC101930421
    See related
    Ensembl:ENSG00000225140
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    See LOC101930421 in Genome Data Viewer
    Location:
    10p15.3
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (628564..631255)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (625209..627900)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (674504..677195)

    Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene disco interacting protein 2 homolog C Neighboring gene uncharacterized LOC124902362 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr10:390524-391723 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr10:409736-410935 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:415094-416033 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:418775-419282 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr10:461462-462661 Neighboring gene RNA, 7SL, cytoplasmic 754, pseudogene Neighboring gene nonconserved acetylation island sequence 51 enhancer Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:537143-537670 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:545619-546565 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr10:552897-553476 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:560455-560955 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:569578-570078 Neighboring gene NANOG hESC enhancer GRCh37_chr10:579126-579627 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:587680-588180 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:602477-603050 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:603051-603624 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:616513-617372 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:617373-618230 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:665809-666308 Neighboring gene uncharacterized LOC124902361 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:671345-672137 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:672138-672929 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:675079-676038 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:678070-679004 Neighboring gene H3K27ac hESC enhancer GRCh37_chr10:685662-686568 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:696476-697298 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:709923-710450 Neighboring gene DIP2C antisense RNA 1 Neighboring gene microRNA 5699

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_147612.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL358216
      Related
      ENST00000451601.3

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

      Range
      628564..631255
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060934.1 Alternate T2T-CHM13v2.0

      Range
      625209..627900
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Other Literature Sources
    Molecular Biology Databases
    Research Materials