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    INTS4P2 integrator complex subunit 4 pseudogene 2 [ Homo sapiens (human) ]

    Gene ID: 644619, updated on 10-Dec-2024

    Summary

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    Official Symbol
    INTS4P2provided by HGNC
    Official Full Name
    integrator complex subunit 4 pseudogene 2provided by HGNC
    Primary source
    HGNC:HGNC:22351
    See related
    Ensembl:ENSG00000273024 AllianceGenome:HGNC:22351
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    INTS4L2
    Expression
    Ubiquitous expression in testis (RPKM 3.6), appendix (RPKM 3.0) and 25 other tissues See more
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    Genomic context

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    See INTS4P2 in Genome Data Viewer
    Location:
    7q11.21
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (65647854..65718688)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (66869949..66940853)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (65112767..65183667)

    Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene integrator complex subunit 4 pseudogene Neighboring gene uncharacterized LOC124901800 Neighboring gene glutamate metabotropic receptor 8 pseudogene Neighboring gene NANOG hESC enhancer GRCh37_chr7:65103805-65104363 Neighboring gene long intergenic non-protein coding RNA 3006 Neighboring gene Sharpr-MPRA regulatory region 6763 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26072 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26073 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18199 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26074 Neighboring gene small nucleolar RNA, H/ACA box 15B-2 Neighboring gene chaperonin containing TCP1 subunit 6 pseudogene 1 Neighboring gene small nucleolar RNA, H/ACA box 22

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    Bibliography

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    Related articles in PubMed

    1. Toward a complete human genome sequence. Sanger Center, et al. Genome Res, 1998 Nov. PMID 9847074
    2. A census of human soluble protein complexes. Havugimana PC, et al. Cell, 2012 Aug 31. PMID 22939629, Free PMC Article
    3. The BioPlex Network: A Systematic Exploration of the Human Interactome. Huttlin EL, et al. Cell, 2015 Jul 16. PMID 26186194, Free PMC Article
    4. Architecture of the human interactome defines protein communities and disease networks. Huttlin EL, et al. Nature, 2017 May 25. PMID 28514442, Free PMC Article
    5. Dual proteome-scale networks reveal cell-specific remodeling of the human interactome. Huttlin EL, et al. Cell, 2021 May 27. PMID 33961781, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Other Names

    • integrator complex subunit 4-like 2

    Clone Names

    • MGC133166

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_027392.2 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC073107
      Related
      ENST00000614726.2

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

      Range
      65647854..65718688
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060931.1 Alternate T2T-CHM13v2.0

      Range
      66869949..66940853
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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