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    CT45A6 cancer/testis antigen family 45 member A6 [ Homo sapiens (human) ]

    Gene ID: 541465, updated on 10-Dec-2024

    Summary

    Official Symbol
    CT45A6provided by HGNC
    Official Full Name
    cancer/testis antigen family 45 member A6provided by HGNC
    Primary source
    HGNC:HGNC:33271
    See related
    Ensembl:ENSG00000278289 MIM:300797; AllianceGenome:HGNC:33271
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    CT45-5; CT45-6; CT45.6; CT45A5; CT45A7
    Expression
    Restricted expression toward testis (RPKM 10.1) See more
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    Genomic context

    See CT45A6 in Genome Data Viewer
    Location:
    Xq26.3
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (135794685..135802787, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) X (PATCHES) NW_004070887.1 (725828..733930, complement)

    Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene cancer/testis antigen family 45 member A3 Neighboring gene cancer/testis antigen family 45 member A5 Neighboring gene cancer/testis antigen family 45 member A2 Neighboring gene cancer/testis antigen family 45 member A7

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    cancer/testis antigen family 45 member A6
    Names
    Cancer/testis antigen 45-5
    Cancer/testis antigen 45A5
    Cancer/testis antigen 45A7
    Cancer/testis antigen family 45 member A5
    Cancer/testis antigen family 45 member A7
    cancer/testis antigen 45-4/6
    cancer/testis antigen 45-6
    cancer/testis antigen 45A4/45A6
    cancer/testis antigen 45A6
    cancer/testis antigen CT45-6
    cancer/testis antigen family 45 member A4/A6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001017438.3NP_001017438.2  cancer/testis antigen family 45 member A6

      See identical proteins and their annotated locations for NP_001017438.2

      Status: VALIDATED

      Source sequence(s)
      AC240441
      Consensus CDS
      CCDS35407.1
      UniProtKB/Swiss-Prot
      A8K842, B7ZMC5, P0DMU7, P0DMU8, P0DMV0, Q6NSH3
      Related
      ENSP00000479608.2, ENST00000620654.2
      Conserved Domains (1) summary
      pfam15300
      Location:122183
      INT_SG_DDX_CT_C; INTS6/SAGE1/DDX26B/CT45 C-terminus

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

      Range
      135794685..135802787 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011531351.3XP_011529653.1  cancer/testis antigen family 45 member A6 isoform X1

      See identical proteins and their annotated locations for XP_011529653.1

      UniProtKB/Swiss-Prot
      A8K842, B7ZMC5, P0DMU7, P0DMU8, P0DMV0, Q6NSH3
      Related
      ENSP00000483910.1, ENST00000612878.4
      Conserved Domains (1) summary
      pfam15300
      Location:122183
      INT_SG_DDX_CT_C; INTS6/SAGE1/DDX26B/CT45 C-terminus
    2. XM_005262425.5XP_005262482.2  cancer/testis antigen family 45 member A6 isoform X1

      See identical proteins and their annotated locations for XP_005262482.2

      UniProtKB/Swiss-Prot
      A8K842, B7ZMC5, P0DMU7, P0DMU8, P0DMV0, Q6NSH3
      Conserved Domains (1) summary
      pfam15300
      Location:122183
      INT_SG_DDX_CT_C; INTS6/SAGE1/DDX26B/CT45 C-terminus