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    IQCF2 IQ motif containing F2 [ Homo sapiens (human) ]

    Gene ID: 389123, updated on 9-Dec-2024

    Summary

    Official Symbol
    IQCF2provided by HGNC
    Official Full Name
    IQ motif containing F2provided by HGNC
    Primary source
    HGNC:HGNC:31815
    See related
    Ensembl:ENSG00000184345 AllianceGenome:HGNC:31815
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Summary
    Predicted to enable calmodulin binding activity. [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Restricted expression toward testis (RPKM 21.0) See more
    Orthologs
    NEW
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    Genomic context

    See IQCF2 in Genome Data Viewer
    Location:
    3p21.2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (51861615..51863424)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (51894593..51896404)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (51895631..51897440)

    Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene IQ motif containing F4, pseudogene Neighboring gene IQ motif containing F3 Neighboring gene RNA, 7SL, cytoplasmic 504, pseudogene Neighboring gene IQCF5 antisense RNA 1 Neighboring gene IQ motif containing F5

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    IQ domain-containing protein F2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_203424.2NP_982248.1  IQ domain-containing protein F2

      See identical proteins and their annotated locations for NP_982248.1

      Status: VALIDATED

      Source sequence(s)
      AC097636, AK128883, BC040047
      Consensus CDS
      CCDS2835.1
      UniProtKB/Swiss-Prot
      Q8IXL9
      Related
      ENSP00000329904.3, ENST00000333127.4

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

      Range
      51861615..51863424
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060927.1 Alternate T2T-CHM13v2.0

      Range
      51894593..51896404
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)