U.S. flag

An official website of the United States government

Links from GEO Profiles

    • Showing Current items.

    syf2 SYF2 family splicing factor syf2 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2540611, updated on 18-Sep-2024

    Summary

    Official Symbol
    syf2
    Official Full Name
    SYF2 family splicing factor syf2
    Primary source
    PomBase:SPBC3E7.13c
    Locus tag
    SPOM_SPBC3E7.13C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See syf2 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    2
    Sequence:
    Chromosome: II; NC_003423.3 (2683836..2684840, complement)

    Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene DNAJ domain-containing protein type Caj1/Djp1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene chitin synthase regulatory factor Neighboring gene ncRNA Neighboring gene sphingosine N-acyltransferase Lac1 Neighboring gene Sm snRNP core protein Smf1 Neighboring gene ncRNA

    Pathways from PubChem

    Interactions

    General gene information

    Gene Ontology Provided by PomBase

    Component Evidence Code Pubs
    part_of Prp19 complex  
    part_of Prp19 complex PubMed 
    part_of U2-type prespliceosome  
    part_of catalytic step 2 spliceosome  
    part_of post-mRNA release spliceosomal complex  
    part_of post-mRNA release spliceosomal complex PubMed 
    part_of spliceosomal complex PubMed 

    General protein information

    Preferred Names
    SYF2 family splicing factor syf2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003423.3 Reference assembly

      Range
      2683836..2684840 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001022016.3NP_596100.1  SYF2 family splicing factor syf2 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_596100.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O59733
      Conserved Domains (1) summary
      pfam08231
      Location:68224
      SYF2; SYF2 splicing factor
    Loading
    External link. Please review our privacy policy.